Pairwise Alignments
Query, 555 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58
Subject, 529 a.a., microcin C ABC transporter ATP-binding protein YejF from Escherichia coli ECRC98
Score = 489 bits (1258), Expect = e-142
Identities = 260/524 (49%), Positives = 362/524 (69%), Gaps = 2/524 (0%)
Query: 25 IIDARNIAVTFKVEHGTVEAVKDISFQLYRGETIAIVGESGSGKSVTARTIMGLLTKRAS 84
++ +++V F+ + V D+S Q+ GET+A+VGESGSGKSVTA +I+ LL
Sbjct: 5 LLAIEDLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPV 64
Query: 85 VSKSATVRFNGDDILRFSSRQRRALRGNRISMIFQEPMSSLNPIYTIGSQIVEAIRVHSR 144
S +RF+G+ +L S + R +RGN+I+MIFQEPM SLNP++T+ Q+ E + +H
Sbjct: 65 EYLSGDIRFHGESLLHASDQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRG 124
Query: 145 LSRKEAEARALDLLRQVQIPEPEARLKQYPHQLSGGQRQRVMIAMALSNDPDVLIADEPT 204
+ R+ A L+ L +V I + RL YPHQLSGG+RQRVMIAMAL P++LIADEPT
Sbjct: 125 MRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRPELLIADEPT 184
Query: 205 TALDVTVQAQILNLIRDLQKKRGMAVVLITHDLTIVKQFSDYVYVMQHGEMREHNTTERL 264
TALDV+VQAQIL L+R+LQ + M ++ ITH+L+IV++ + V VMQ+G E N L
Sbjct: 185 TALDVSVQAQILQLLRELQGELNMGMLFITHNLSIVRKLAHRVAVMQNGRCVEQNYAATL 244
Query: 265 FAAPQHPYTKRLLASEPRGTAKPLPENSGVLLTASGVRVSFMMRYGGLFKPELKELIAVD 324
FA+P HPYT++LL SEP G PLPE + LL ++V+F +R G+ K + + V
Sbjct: 245 FASPTHPYTQKLLNSEPSGDPVPLPEPASTLLDVEQLQVAFPIR-KGILKRIVDHNVVVK 303
Query: 325 SLGLTLKRHETLGLVGESGSGKTTFGQSLLRLNEPVGGEVIFDGERVDGRSRSEMRPLRS 384
++ TL+ ETLGLVGESGSGK+T G +LLRL G +IFDG+ + +R ++ P+R
Sbjct: 304 NISFTLRAGETLGLVGESGSGKSTTGLALLRLINS-QGSIIFDGQPLQNLNRRQLLPIRH 362
Query: 385 RMQIVFQDPFASLNPRMTIGQIIEEGLIINGLGRTKAERLERVRDALEAAGMPGNILSRF 444
R+Q+VFQDP +SLNPR+ + QIIEEGL ++ + A+R ++V D + G+ R+
Sbjct: 363 RIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIDVMHEVGLDPETRHRY 422
Query: 445 PHEFSGGQRQRIAIARAVALEPEFILLDEPTSALDLSVQAQIIDLLRKLQDERGLSYLFI 504
P EFSGGQRQRIAIARA+ L+P I+LDEPTS+LD +VQAQI+ LL+ LQ + L+YLFI
Sbjct: 423 PAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILTLLKSLQQKHQLAYLFI 482
Query: 505 SHDLKVVRALCHRVIVMQGGRIVEEGPVEDVLTNPKTEYTQRLV 548
SHDL VVRALCH+VIV++ G +VE+GP V P+ EYT++L+
Sbjct: 483 SHDLHVVRALCHQVIVLRQGEVVEQGPCARVFATPQQEYTRQLL 526
Score = 183 bits (464), Expect = 2e-50
Identities = 106/264 (40%), Positives = 160/264 (60%), Gaps = 17/264 (6%)
Query: 23 NAIIDARNIAVTFKVEHGTVE-------AVKDISFQLYRGETIAIVGESGSGKSVTARTI 75
+ ++D + V F + G ++ VK+ISF L GET+ +VGESGSGKS T +
Sbjct: 273 STLLDVEQLQVAFPIRKGILKRIVDHNVVVKNISFTLRAGETLGLVGESGSGKSTTGLAL 332
Query: 76 MGLLTKRASVSKSATVRFNGDDILRFSSRQRRALRGNRISMIFQEPMSSLNPIYTIGSQI 135
+ L+ + S+ F+G + + RQ +R +RI ++FQ+P SSLNP + I
Sbjct: 333 LRLINSQGSII------FDGQPLQNLNRRQLLPIR-HRIQVVFQDPNSSLNPRLNVLQII 385
Query: 136 VEAIRVHS-RLSRKEAEARALDLLRQVQIPEPEARLKQYPHQLSGGQRQRVMIAMALSND 194
E +RVH LS + E + +D++ +V + +PE R +YP + SGGQRQR+ IA AL
Sbjct: 386 EEGLRVHQPTLSAAQREQQVIDVMHEVGL-DPETR-HRYPAEFSGGQRQRIAIARALILK 443
Query: 195 PDVLIADEPTTALDVTVQAQILNLIRDLQKKRGMAVVLITHDLTIVKQFSDYVYVMQHGE 254
P ++I DEPT++LD TVQAQIL L++ LQ+K +A + I+HDL +V+ V V++ GE
Sbjct: 444 PSLIILDEPTSSLDKTVQAQILTLLKSLQQKHQLAYLFISHDLHVVRALCHQVIVLRQGE 503
Query: 255 MREHNTTERLFAAPQHPYTKRLLA 278
+ E R+FA PQ YT++LLA
Sbjct: 504 VVEQGPCARVFATPQQEYTRQLLA 527
Score = 167 bits (423), Expect = 9e-46
Identities = 98/236 (41%), Positives = 148/236 (62%), Gaps = 9/236 (3%)
Query: 323 VDSLGLTLKRHETLGLVGESGSGKTTFGQSLLRLN-----EPVGGEVIFDGERVDGRSRS 377
V+ + L ++ ETL LVGESGSGK+ S+LRL E + G++ F GE + S
Sbjct: 25 VNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVEYLSGDIRFHGESLLHASDQ 84
Query: 378 EMRPLR-SRMQIVFQDPFASLNPRMTIGQIIEEGLIINGLGRTKAERLERVRDALEAAGM 436
+R +R +++ ++FQ+P SLNP T+ + + E L ++ R +A R E + + L+ G+
Sbjct: 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGE-ILNCLDRVGI 143
Query: 437 --PGNILSRFPHEFSGGQRQRIAIARAVALEPEFILLDEPTSALDLSVQAQIIDLLRKLQ 494
L+ +PH+ SGG+RQR+ IA A+ PE ++ DEPT+ALD+SVQAQI+ LLR+LQ
Sbjct: 144 RQAAKRLTDYPHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQ 203
Query: 495 DERGLSYLFISHDLKVVRALCHRVIVMQGGRIVEEGPVEDVLTNPKTEYTQRLVRA 550
E + LFI+H+L +VR L HRV VMQ GR VE+ + +P YTQ+L+ +
Sbjct: 204 GELNMGMLFITHNLSIVRKLAHRVAVMQNGRCVEQNYAATLFASPTHPYTQKLLNS 259