Pairwise Alignments

Query, 378 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 302 a.a., oligopeptide ABC transporter permease OppC from Escherichia coli ECOR38

 Score =  180 bits (456), Expect = 5e-50
 Identities = 94/227 (41%), Positives = 142/227 (62%), Gaps = 11/227 (4%)

Query: 153 HFLGTDKFGRDVLSRAIYGSRISLAIALSVVAIVTVIGTSVGLISGYFGGPLDAWLQRFV 212
           H+ GTD  GRD+L R   G RISL + ++   +  V+GT  G +SGY GG +D+ + R +
Sbjct: 82  HYFGTDSSGRDLLVRVAIGGRISLMVGVAAALVAVVVGTLYGSLSGYLGGKVDSVMMRLL 141

Query: 213 EVVLAFPQLPLYLALTSLIPVTAPTTVFLLFV-VGVMSALGWAQMSREVRGKTLALARID 271
           E++ +FP    ++    L+       + L+FV +G++S   W  M+R VRG+TL+L R +
Sbjct: 142 EILNSFP----FMFFVILLVTFFGQNILLIFVAIGMVS---WLDMARIVRGQTLSLKRKE 194

Query: 272 YVRAAIAVGATDRRIIFQHILPNVMSHVIVAVTLHIPSVVLLESFLGFLGFAVKPPLISW 331
           ++ AA   G +   I+ +HI+PNV+  V+V  +L +PS++L ESFL FLG   + PL SW
Sbjct: 195 FIEAAQVGGVSTPGIVIRHIVPNVLGVVVVYASLLVPSMILFESFLSFLGLGTQEPLSSW 254

Query: 332 GLMLQDTATYSVIGSYPWILA-PVGFVLVTVFAFNALGDGLRDAVDP 377
           G +L D A    +   PW+L  P GF++VT+F FN +GDGLRDA+DP
Sbjct: 255 GALLSDGANSMEVS--PWLLLFPAGFLVVTLFCFNFIGDGLRDALDP 299