Pairwise Alignments

Query, 378 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 268 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  152 bits (385), Expect = 8e-42
 Identities = 88/226 (38%), Positives = 130/226 (57%), Gaps = 9/226 (3%)

Query: 153 HFLGTDKFGRDVLSRAIYGSRISLAIALSVVAIVTVIGTSVGLISGYFGGPLDAWLQRFV 212
           H+LGTD  GRD+LSR IYG+R SL   +  V I  VIG   GLI+GYFGG +D  + R  
Sbjct: 48  HWLGTDDLGRDILSRMIYGARASLMAGVVSVMIAVVIGVPFGLIAGYFGGWVDMVISRIT 107

Query: 213 EVVLAFPQLPLYLALTSLIPVTAPTTVFLLFVVGVMSALGWAQMSREVRGKTLALARIDY 272
           E +LA P L + +AL + +    P+    +  +G+ +   + +++   RG+ LA+   DY
Sbjct: 108 EALLAMPFLIMAIALAAFL---GPSLTNAMIAIGLSAMPIFVRLT---RGQVLAVKMEDY 161

Query: 273 VRAAIAVGATDRRIIFQHILPNVMSHVIVAVTLHIPSVVLLESFLGFLGFAVKPPLISWG 332
           V  A ++G     I+ ++ILPNV + +IV  TL + + ++ E+ L FLG   + P  SWG
Sbjct: 162 VEGARSIGLNHIDIMTRYILPNVFAPIIVQATLTVATAIIAEASLSFLGLGQQAPAPSWG 221

Query: 333 LMLQDTATYSVIGSYPWI-LAPVGFVLVTVFAFNALGDGLRDAVDP 377
            ML     +  +   PW+ L P   + + V  FN LGDGLRDA+DP
Sbjct: 222 SMLNTAKNF--LSQAPWMTLWPGIAIFLVVIGFNLLGDGLRDALDP 265