Pairwise Alignments

Query, 378 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 338 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  173 bits (439), Expect = 6e-48
 Identities = 96/225 (42%), Positives = 145/225 (64%), Gaps = 9/225 (4%)

Query: 154 FLGTDKFGRDVLSRAIYGSRISLAIALSVVAIVTVIGTSVGLISGYFGGPLDAWLQRFVE 213
           F GTD  GRD+L+R + G +IS+A+ +    +   IG   G  +GY GG +D  + RFVE
Sbjct: 119 FFGTDSNGRDMLARVMLGGQISIAVGILASLVSLGIGVLYGATAGYIGGRVDNVMMRFVE 178

Query: 214 VVLAFPQLPLYLALTSLIPVTAPTTVFLLFVVGVMSALGWAQMSREVRGKTLALARIDYV 273
           ++ + P    ++ L  ++ V    +  L+F+V  + A+ W  M+R VRG+TLAL R ++V
Sbjct: 179 ILYSLP----FVFLVVVLVVFFGRSFILIFLV--IGAVEWLDMARIVRGQTLALKRREFV 232

Query: 274 RAAIAVGATDRRIIFQHILPNVMSHVIVAVTLHIPSVVLLESFLGFLGFAVKPPLISWGL 333
            AA A+G +D +II +HI+PN +  V+V VT+ +P V+LLESFL FLG  V+ PL SWG 
Sbjct: 233 GAAQALGLSDWQIIRRHIIPNTIGPVVVFVTVVVPKVILLESFLSFLGLGVQAPLTSWGA 292

Query: 334 MLQDTATYSVIGSYPWILA-PVGFVLVTVFAFNALGDGLRDAVDP 377
           ++ + A  + I S PW+L  P  F ++T+F+ N +GDGLRDA+DP
Sbjct: 293 LISEGA--NNIQSAPWLLIFPAIFFVLTLFSLNFVGDGLRDALDP 335