Pairwise Alignments

Query, 378 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 374 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  252 bits (643), Expect = 1e-71
 Identities = 138/366 (37%), Positives = 211/366 (57%), Gaps = 7/366 (1%)

Query: 16  KPERGTQGNESYLALVWRRLRRSVTGMLGLVLVALLILIAIFADFFAPMNPLETNA--SF 73
           +P+R    ++    L+W   +R    M  LV+   + ++A+   FFA  +P+  NA  +F
Sbjct: 11  RPDRAAVASQ--WQLIWWAFKRHRLAMAALVVTIAMYVVALVPGFFAINDPVLQNARATF 68

Query: 74  SPPQVVRFTDKDGNFSPFPRVYATADTAELDPVTFQPIVGPDYDNPVYLGFFVKGSEYRL 133
            PPQ V   D    FS     Y    T   +P T   +   D    + +  F +G EY +
Sbjct: 69  YPPQRVHLIDTTDGFSVGLHYYPLKLTR--NPETLAAVFVEDTGKKIPIQLFGRGYEYSV 126

Query: 134 LGLIPMSRHFFGSTDG-KPVHFLGTDKFGRDVLSRAIYGSRISLAIALSVVAIVTVIGTS 192
           LGL   + H   STD  +P+   G D+ GRDV SR + GS+ISL+I L  V    ++G  
Sbjct: 127 LGLFDTNIHLLASTDKTRPLFLFGADRLGRDVFSRVVQGSQISLSIGLVGVFFSLLLGVV 186

Query: 193 VGLISGYFGGPLDAWLQRFVEVVLAFPQLPLYLALTSLIPVTAPTTVFLLFVVGVMSALG 252
           +G ISGY+GG +D  +QR ++ VL+ P +P++LA+ + +P   P T+  + +  ++S  G
Sbjct: 187 LGGISGYYGGRIDFVMQRVIDFVLSLPTIPIWLAMAAALPQGWPATLQYMMITIILSLTG 246

Query: 253 WAQMSREVRGKTLALARIDYVRAAIAVGATDRRIIFQHILPNVMSHVIVAVTLHIPSVVL 312
           WAQ++R VRG+ L+L   ++V AA   G  + RIIF+H+LP+  SH+I +VTL +P+++L
Sbjct: 247 WAQLARVVRGRFLSLRTEEFVAAARLDGVPEGRIIFRHMLPSFSSHIIASVTLAVPAMIL 306

Query: 313 LESFLGFLGFAVKPPLISWGLMLQDTATYSVIGSYPWILAPVGFVLVTVFAFNALGDGLR 372
            E+ L FLG  ++PP ISWG++L++      I + PW+  P   V+V V A N LGDGLR
Sbjct: 307 AETSLSFLGLGLQPPTISWGVLLREAQNIRSIATAPWLFLPGVAVVVAVMALNLLGDGLR 366

Query: 373 DAVDPY 378
           DA DPY
Sbjct: 367 DAADPY 372