Pairwise Alignments

Query, 335 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 315 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  167 bits (424), Expect = 2e-46
 Identities = 106/328 (32%), Positives = 179/328 (54%), Gaps = 28/328 (8%)

Query: 8   RVASAIPVLLILSVVTFAIIQAPPGDYADYIRSQLMNQGGASFEQAEAQAQAYRIEHGLD 67
           R+  AIP LLI+S+  F++ +  PGD        ++   G   E+  A  +  R ++ L+
Sbjct: 8   RLLVAIPTLLIISIFVFSLQKLLPGD-------PVLAMAGE--ERDPATIEFLREKYRLN 58

Query: 68  KPLVIQYFNWIGGIITRGDFGYSFYYNKPVADVVGERLPRTIALALVCHIFASVLGIAFG 127
            P+ +QY NW+GG++T GDFG S   N+PV +++G++LP TI LA++   FA V+GI  G
Sbjct: 59  DPVPLQYLNWLGGVVT-GDFGISLRTNQPVLELIGQKLPVTIQLAVMAMFFAMVIGIPIG 117

Query: 128 IWAATRQYSWVDNLLSTIAFLGMTIPRFLMALILVYLMVFHFDVSEIGSFFSPQYGGAPW 187
           I AA ++ +W+D   + +A  G++IP F + ++L+ L+             S + G  P 
Sbjct: 118 ILAAVKKNTWIDYTANIVALSGLSIPNFWLGIMLILLV-------------SVKLGWLPA 164

Query: 188 SWGK--FVDLVSHVWPVVAIAVFGG---LAYNMRVMRGNLLDTLNAQYVETARAKGLSEG 242
           S  +  FVD V  +  ++  A   G    A  MR  R  ++  L++ Y+ TARAKGLS  
Sbjct: 165 SGYESIFVDPVRSIETMIMPAFVLGNALAATLMRHTRSAMVAVLSSDYIRTARAKGLSPR 224

Query: 243 AVIMRHAVPNAVHPLVMYQGVVLPYMLSGEIETAIIFALPTVGPAIVGSMAVGDVYVTAT 302
            +I+ H+  NA+ P++    ++   +L+G + T  IF +P  G   V ++   D  V   
Sbjct: 225 EIILSHSFRNALLPVITLLALLFGELLAGAVLTEQIFTIPGFGKMTVDAVFTRDYAVVQG 284

Query: 303 FMMVLAATLIVGNIIADMLLAMLDPRVR 330
            ++  A   I+ N++AD+   +L+PR+R
Sbjct: 285 IVLCTAVGFILMNLLADIAYVLLNPRLR 312