Pairwise Alignments

Query, 335 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 316 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  155 bits (392), Expect = 1e-42
 Identities = 104/335 (31%), Positives = 173/335 (51%), Gaps = 20/335 (5%)

Query: 1   MLRFLTIRVASAIPVLLILSVVTFAIIQAPPGDYADYIRSQLMNQGGASFEQAEAQAQAY 60
           ML  L  R+ S I  L  +S++ + ++   PGD A    + ++    +    A  Q Q  
Sbjct: 1   MLAVLIRRLVSLIITLFAVSLIIYVVMGLLPGDPA----AIMLGTSASPDTLAALQKQM- 55

Query: 61  RIEHGLDKPLVIQYFNWIGGIITRGDFGYSFYYNKPVADVVGERLPRTIALALVCHIFAS 120
               GLD+PL ++Y +W+ G+  RGD G S+ Y  PVA ++ ERL  T+ LAL+    + 
Sbjct: 56  ----GLDQPLPLRYLHWLAGVF-RGDLGQSYTYGVPVAGLIIERLAVTLPLALLAIFLSV 110

Query: 121 VLGIAFGIWAATRQYSWVDNLLSTIAFLGMTIPRFLMALILVYLMVFHFDVSEIGSFFSP 180
            + I  G+ AA  +   +D      + +G+ +P F + L+L+  +VF   +  + S    
Sbjct: 111 TIAIPLGVAAAQNRNGALDFAAGLFSHVGIAVPGFWVGLLLI--IVFSTTLGWMPS---- 164

Query: 181 QYGGAP-WSWGKFVDLVSHVWPVVAIAVFGGLAYNMRVMRGNLLDTLNAQYVETARAKGL 239
             GG P WS      LV+ V P +A+A+        RV R  +L+ +N  +V TARAKGL
Sbjct: 165 --GGFPGWSPSFSAGLVALVLPAIALAL-SQAGVLTRVCRSAVLEVMNEDFVRTARAKGL 221

Query: 240 SEGAVIMRHAVPNAVHPLVMYQGVVLPYMLSGEIETAIIFALPTVGPAIVGSMAVGDVYV 299
           SE   + RHAVPNA+ P+V   G+   ++++G +    +F LP +G     ++   D+ V
Sbjct: 222 SERVALWRHAVPNAMIPVVTMIGLQFTFLIAGAVLVENVFNLPGLGRLAYQALTQRDIVV 281

Query: 300 TATFMMVLAATLIVGNIIADMLLAMLDPRVREFGR 334
             + ++  +A +I+ N + D+    +DPR+R   R
Sbjct: 282 MQSVVLFFSALVIIMNFVVDIAYLFIDPRLRAGAR 316