Pairwise Alignments

Query, 335 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 302 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  159 bits (403), Expect = 6e-44
 Identities = 101/319 (31%), Positives = 169/319 (52%), Gaps = 20/319 (6%)

Query: 13  IPVLLILSVVTFAIIQAPPGDYADYIRSQLMNQGGASFEQAEAQAQAYRIEHGLDKPLVI 72
           I V+ ++  + F I++  PGD A    + ++     + + AE + +      GLD+ L +
Sbjct: 2   IVVMFLVVTIVFVILRVTPGDPA----AVMLGPDATAQDIAELRTRL-----GLDQSLGV 52

Query: 73  QYFNWIGGIITRGDFGYSFYYNKPVADVVGERLPRTIALALVCHIFASVLGIAFGIWAAT 132
           QY  +IG ++ +GD G S + N PV   + +R   T  L +   + A V+ +  GI+AA 
Sbjct: 53  QYVYYIGQLL-KGDLGQSIFLNMPVGSALLDRAEPTFFLTIFSLLIAGVIALPIGIYAAY 111

Query: 133 RQYSWVDNLLSTIAFLGMTIPRFLMALILVYLMVFHFDVSEIGSFFSPQYGGAPWSWGKF 192
           R+ S+VD   +TIA L  +IP F + LIL+       D+  +  +  P   GA      F
Sbjct: 112 RRGSFVDQAATTIAMLAASIPSFWLGLILMQFFAVRLDLFPVSGYGGP---GA-----SF 163

Query: 193 VDLVSHVW-PVVAIAVFGGLAYNMRVMRGNLLDTLNAQYVETARAKGLSEGAVIMRHAVP 251
           ++ + H+  P +A+ +    A  +R  R ++LD L   YV TARAKG+ E  V+M+HA+ 
Sbjct: 164 LERMYHLTLPAIALGLVSS-ALILRFTRASMLDVLGDDYVRTARAKGVKERRVVMKHALK 222

Query: 252 NAVHPLVMYQGVVLPYMLSGEIETAIIFALPTVGPAIVGSMAVGDVYVTATFMMVLAATL 311
           NA+ P++   G+    ++SG + T  +F LP VG  +V ++   D  V    ++V+A   
Sbjct: 223 NALIPILTVLGLTAAVLISGAVVTETVFGLPGVGNLVVSAVLRRDYPVIQGALLVIAGLY 282

Query: 312 IVGNIIADMLLAMLDPRVR 330
           ++ N   DML  ++DPRVR
Sbjct: 283 VLINFAIDMLYLLVDPRVR 301