Pairwise Alignments

Query, 695 a.a., alpha-galactoside ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 534 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 52.8 bits (125), Expect = 4e-11
 Identities = 107/427 (25%), Positives = 171/427 (40%), Gaps = 87/427 (20%)

Query: 145 LFQVDAKDTEPLPNLAKSWEWSEDGHTLTMHLVKGAKWSDGEA------FNADDVMFYWE 198
           L + +  +T  +P LA  W+ S DG T T HL +G K+   +       FNADDV+F + 
Sbjct: 62  LVEFEKGETGVVPALATKWDISPDGMTYTFHLREGVKFHSNKEFKPTRDFNADDVLFTF- 120

Query: 199 DAVVDPNVSPLGGGASPEAFGEGTTL-------KKIDDYTVEWTFK---AAFPKQYLYTM 248
           + ++DP+        +   +  G +L       +K D +TV  T     AAF +    + 
Sbjct: 121 NRMLDPDHPFRKAYPTEFPYFNGMSLNKNIAKVEKTDPHTVVMTLNTVDAAFIQNIAMSF 180

Query: 249 AYPSFCPGPSHILKPQHPKYSKNTYNQFKNAFPPEYMNMPV-MGAWVPVSYRPDDLIVLR 307
           A          IL  ++ +         K   P +    P+  G +V   Y+ D  I   
Sbjct: 181 A---------AILSAEYAE------QLLKAGKPSDINQKPIGTGPFVFQRYQKDSQIRYV 225

Query: 308 RNPYYWKVDEKGQQLPYLNEVHYKLSTWADRDVQAVAGSGDFSNLEQPENFVASLKRAAD 367
            N  YW           L+++ + ++T A   VQ +        L      V +LK  AD
Sbjct: 226 ANKQYWDPSR-----VKLDQLIFAINTDASVRVQKLKAGECQVTLHPRPADVDALK--AD 278

Query: 368 PNAPARLAFGPRLIGYNLQMNFSANGWGNPDERGQAIRELNRNEVFRQAVTSALDRKAIG 427
           PN   +L   P   G+NL       G+   + R +   +L      RQA+  A+++++I 
Sbjct: 279 PN--LKLLTKP---GFNL-------GYIAYNVRHKPFDQLE----VRQALDMAVNKQSIL 322

Query: 428 DSLVKG----PFTAIYPGGISSGTSFYDRASTVYYPFNLEGAKAALASIGLKDTDGDGFL 483
           +++ +G       A+ P   S   S  D A      +N E AK  L + G+K+       
Sbjct: 323 NAVYQGAGQLAVNAMPPTQWSYDDSIKDAA------YNPEKAKELLKAAGVKE------- 369

Query: 484 NFPKETLGGRNVEITLL---VNNGYATD-KSLAEGLVGQMAKLGLRVVIHSLDSNQRDAA 539
                       EITL    V   Y  + K +AE L    AK+GL+V I S +  +    
Sbjct: 370 ----------GTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGLKVKIVSYEWGEYIKR 419

Query: 540 HYGGQFD 546
              G+ D
Sbjct: 420 TKNGEHD 426