Pairwise Alignments

Query, 695 a.a., alpha-galactoside ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 649 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  150 bits (380), Expect = 1e-40
 Identities = 162/619 (26%), Positives = 269/619 (43%), Gaps = 78/619 (12%)

Query: 73  KAGKLPPLKERLPEEPLVYKTGNMPDGVGVYGDTMRHVVGGRPEGWNYIAGQSQGWGGID 132
           K GKLPPL +RLP+ P+V       + VG YG T+R            + G S   G + 
Sbjct: 49  KDGKLPPLADRLPKNPMVVTPF---EKVGTYGGTLRRG----------LRGSSDHNGILR 95

Query: 133 IALSECLTRTAPLFQVDAKDTEPLPNLAKSWEWSEDGHTLTMHLVKGAKWSDGEAFNADD 192
           +  ++ L R    F      TE LPNLA+ WE S D    T HL++GAKWSDG  F ADD
Sbjct: 96  MVGNQSLVRWNMDF------TEVLPNLAEKWEVSPDASEFTFHLIEGAKWSDGHPFTADD 149

Query: 193 VMFYWEDAVVDPNVSPLGGGASPEAFGEGTTLKKIDDYTVEWTFKAAFPKQYLYTMAYPS 252
           V+F  ED + +  +      A     G+   + K+DD+TV++ F AA    YL  +A P 
Sbjct: 150 VVFAIEDCIKNKELYS-ATPAQLSVAGKAVDVSKVDDFTVKFKF-AAPNALYLENLATPL 207

Query: 253 FCPGPSHILKPQH------PKYSKNTYNQFKNA-----------------FPPEYMNM-- 287
              G    L P+H      PKY+     + K A                  P  + N+  
Sbjct: 208 ---GQHPTLFPKHYCSKFLPKYNAALDAEVKAAGVSSWTELFRAKCGDIEIPSRWSNVDK 264

Query: 288 PVMGAWV---PVSYRPDDLIVLRRNPYYWKVDEKGQQLPYLNEVHYKLSTWADRDVQAVA 344
           P +  WV   P S      +V+ RNPY+W+VD  G QLPY+NE+++ +S    +DV+++ 
Sbjct: 265 PTLDPWVVKEPYS-GGATRVVMTRNPYFWQVDTDGNQLPYINEINFGIS----QDVESLM 319

Query: 345 GSGDFSNLEQPENFVASLKRAADPNAPARLAFGP-RLIGYNLQMNFSANGWGNPDERGQA 403
            +     ++  E  ++ L  A  P     +  G  RL+            + N   +  A
Sbjct: 320 LNVISGKIDIQERHISVL--ANKPTLSQNMEKGNYRLMTLVPSAAQQCQIYLNITHKDPA 377

Query: 404 IRELNRNEVFRQAVTSALDRKAIGDSLVKGPFTAIYPGGISSGTSFYDRASTVYYPFNLE 463
           +R++  ++ FRQA++  L+R+ I + +  G   A   G   +   ++++ +     F+ +
Sbjct: 378 MRKMFADKSFRQALSLGLNRQEIIEIVYFGQSEAYQTGPRPTHPWYHEKLARQSTEFDAD 437

Query: 464 GAKAALASIGLKDTDGDGFLNFPKETLGGRNVEITL-LVNNGYATDKSLAEGLVGQMAKL 522
            A   L   G    +G+G    P     G+ +  ++ ++   Y       E +  Q A++
Sbjct: 438 KANELLDKAGYDKKNGNGIRLRP----DGQPIFFSIDVIPTLYPDLVDTLELVKAQWAQI 493

Query: 523 GLRVVIHSL---------DSNQRDAAHYGGQFDWLVRRNSTELSSVVQNTEQLAPVGPRT 573
           G+ + ++++         D N  DAA + G        +  +  +      + A   P  
Sbjct: 494 GVDIKVNTIERALYYTRGDDNAHDAAVWPGPGGLDPMLDPRDFFAFHPQGSRYAI--PWA 551

Query: 574 SWNHRSPEGKELDLMPFEKEMADIVRKFISSQDNAERADLMKQYQKVYTQNLYTIGLTEY 633
            W + S   K  +    +K+   +  +  S+ D A+R + MKQ   +  +   TIG+   
Sbjct: 552 LW-YTSNGQKGEEPPESQKKRFKLFDEARSTADIAKRGEFMKQIFDIAAEEFETIGVCLA 610

Query: 634 PGAL-IVNKRFSNVPQGTP 651
            G   I+     NVP+  P
Sbjct: 611 VGGFGIIRNNLHNVPEKEP 629