Pairwise Alignments

Query, 695 a.a., alpha-galactoside ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 543 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 67.8 bits (164), Expect = 1e-15
 Identities = 95/336 (28%), Positives = 131/336 (38%), Gaps = 54/336 (16%)

Query: 154 EPLPNLAKSWEWSEDGHTLTMHLVKGAKWSDGEAFNADDVMFYWEDAVVDPNVSPLGGGA 213
           +P P LA+SWE S DG   T  L KG KW DG+ F A DV F     +    V P G   
Sbjct: 92  KPHPVLAESWETSADGLRYTFKLRKGVKWHDGKDFTAQDVKF---SLLAFKKVGPRG--- 145

Query: 214 SPEAFGEGTTLKKIDDYTVEWTFKAAFPKQYLYTMAYPSFCPGPSHILKPQHPKYSKNTY 273
               F     ++  +  T       + P  YL      +   G + IL P H  Y+   Y
Sbjct: 146 -RITFANLADIETPNPLTA--VVVLSKPAPYLLR----ALTGGETPIL-PAH-AYASENY 196

Query: 274 NQFKNAFPPEYMNMPVMGAWVPVSYRPDDLIVLRRNPYYWKVDEKGQQLPYLNE-VHYKL 332
           N+  N   P      V   W   SY     + L++NP YW+ D     LPYL+  V   +
Sbjct: 197 NESPNGNAPVGTGPFVFEEWKRGSY-----VKLKKNPDYWQAD-----LPYLDGFVARFV 246

Query: 333 STWADRDVQAVAGSGDFS---NLEQPENFVASLKRAADPNAPARLAFGPRLIGYNLQMNF 389
           +  A   +    G  D++   +    E    + K A +    A L     +  +NL+   
Sbjct: 247 ADAASTTISVETGEADYTADVSYSDLERLRQNPKLAVEVYTDAYLN-NAAIFEFNLE--- 302

Query: 390 SANGWGNPDERGQAIRELNRNEVFRQAVTSALDRKAIGDSLVKGPFTAIYPGG--ISSGT 447
                        AI  L + EV R A+  A+DR  I D++    F    P G  I +  
Sbjct: 303 ------------NAI--LAKKEV-RHALAHAIDRNFINDAIF---FGTAKPAGSNIPAVF 344

Query: 448 SFYDRASTVYYPFNLEGAKAALASIGL-KDTDGDGF 482
           S Y+      YPF+L  A   L   G  K  DG  F
Sbjct: 345 STYNDEKPFTYPFDLAKANELLDKAGYPKGADGTRF 380