Pairwise Alignments

Query, 303 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 326 a.a., putative membrane protein from Variovorax sp. SCN45

 Score =  104 bits (259), Expect = 3e-27
 Identities = 82/292 (28%), Positives = 133/292 (45%), Gaps = 17/292 (5%)

Query: 4   DGQSEKQENPRETDTR---AGVGWLLLDMTLVSGGMTALVKAQGVTYPAFQLVFIR---- 56
           D +S  +   R  ++    AG+G ++L  T     +    K   +  P    V+ R    
Sbjct: 19  DSRSAVRRTARSIESERILAGIGLVVL-ATACFATLDTATKFSTLGVPILMGVWFRYAFQ 77

Query: 57  AMVGLIFILPLIWRHRGEMVRVKYPWRNLFRICCNAIALTSNFIAITLLPLATVNAVGFS 116
           A+     +LPL   H   ++R ++P     R      +   +F+++  +PLA   ++   
Sbjct: 78  AVATTAVLLPL---HGTALLRTQHPRYQALRGALLLSSSVFSFLSLRYMPLAEFTSIVLI 134

Query: 117 RPLVTMAMAVAFLGETVSRFRWVGASLAFVGVLVVIGPDGAEFGVGVLVVLVSVVFGALA 176
            PLV   +A   L E VS  RW   +  F G LV++ P G  F   +L+ L  V+  A  
Sbjct: 135 APLVITLLAATTLKEHVSPLRWTLVAGGFAGTLVILRPGGGTFSWAILLPLGLVLTNAWF 194

Query: 177 VIQTRALRQENTTVMMVFYTVGLAVITA---IPAIWTWKPVASFDWVALLGI-GLLAQMG 232
            + T  L Q    + M FYT  +  + A   +P  WT  P  S++W ALL + G +  +G
Sbjct: 195 QVLTSKLAQTENPLTMHFYTGWIGTLIASLVVPFAWTALP--SWEWWALLCLMGFMGTVG 252

Query: 233 QYCFLRAYRIADASVLAPVGYLSILFVTAVGYFLFDEVPENRVVLGIAIILV 284
            +  + AY+ A AS L P  Y  I F    G+ +F  VP+   ++G+A+I V
Sbjct: 253 HFMLILAYQRAPASTLTPYLYAQIAFAMLGGWLIFSHVPDRFSLIGMAMIAV 304