Pairwise Alignments

Query, 421 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 428 a.a., mannose/glucose ABC transporter, glucose-binding periplasmic protein from Pseudomonas putida KT2440

 Score = 50.8 bits (120), Expect = 8e-11
 Identities = 71/251 (28%), Positives = 108/251 (43%), Gaps = 39/251 (15%)

Query: 72  QTRVIAANLSG----KGPDVMQLFYGWLDKFAAGGILQP-LPKDAFPHDKIESEFFP-IV 125
           ++R +A N  G    KGPD+          +AA G+L   + KD     K +S     + 
Sbjct: 77  KSRAVAGNPPGVAQIKGPDIQD--------WAATGLLDADVLKDVAKEGKWDSLLDKKVA 128

Query: 126 SAMKRGDDYYGLPTAVRSLA-LFYNKKLFTEAGLDAANPPKTLDEFVAAAEKIAKHDAAG 184
             +K   DY  +P  +  +  L+ N ++F +AG+D A  P TLDEF AAA+K+    AAG
Sbjct: 129 DTVKYDGDYVAVPVNIHRINWLWINPEVFKKAGIDKA--PTTLDEFYAAADKL---KAAG 183

Query: 185 NLTVAGSTLDMGGQDHQWWREVLIRQYGGEPYADNDQKVTYNSEPGIQALKFYTSLQLEK 244
            + +A        QD   +  V++   G + Y      +   +  G Q +K  T L   K
Sbjct: 184 FIPLAHG--GQPWQDSTVFESVVLSVMGVDGYKKALVDLDSATLTGPQMVKALTEL---K 238

Query: 245 KIGQVGFMD---EGQ------AAFRAGKAGMTIDGTFRLGSFRTIKDF---EWGVTELPT 292
           K+    +MD   +GQ      A    GKAGM I G +    +   K     ++     P 
Sbjct: 239 KVAT--YMDPDGKGQDWNLEAAKVINGKAGMQIMGDWAKSEWTLAKKTAGKDYQCVPFPG 296

Query: 293 NDKNIRSNYAS 303
            DK+   N  S
Sbjct: 297 TDKSFLYNIDS 307