Pairwise Alignments

Query, 280 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 277 a.a., carbohydrate ABC transporter permease from Serratia liquefaciens MT49

 Score =  142 bits (357), Expect = 1e-38
 Identities = 70/271 (25%), Positives = 142/271 (52%), Gaps = 1/271 (0%)

Query: 11  RIRPGRIVAWTLLFIGGLIMVSPLLFMFATSFKTADQVYDLRLIPAAPTIANYMTVMADG 70
           R   G++V + L+ +   + + P  +    + +    +  + L   +  + NY  +    
Sbjct: 7   RFDTGKLVIYLLVSLFASLSLFPFYWSALLATQDTRSIMGMSLRFGSHLLENYRGLEQQV 66

Query: 71  RFLRWFFNSTLVAVLVTVSNCFFDSLVGYTLAKFEFRGRYFIFLAILSTLMIPTEMLVIP 130
            F R   N+  V  + T+++    +  GY  + ++F+G+  +F  ++ T+M+P+ + ++P
Sbjct: 67  PFTRSLLNTLYVTAMATLTSVLVSAAAGYAFSVYQFKGKKVLFTTLMLTMMVPSVVNLVP 126

Query: 131 WYLMSSQLGWLDSYWGIMFPGMMTAFGTFLMKQFFET-VPNDFLEAARVDGLNEFQIWWK 189
           ++ +   +G LD +  +  P  +  FG FL++Q+  + +P++ L++AR+DGLNE QI+ +
Sbjct: 127 YFFVIKSVGLLDQFAAVWLPAGVNIFGIFLVRQYVSSSLPSEILDSARMDGLNELQIFLR 186

Query: 190 VALPLVTPALSALAIFTFLGNWTAFFWPLIVTTSKELYTLPVGLSSFAVEQQIQWEMIMT 249
           + LPL+ PAL  +AI   +  W  F  PL+   S +   L + L S +      W ++MT
Sbjct: 187 IGLPLMRPALLTVAIVVVVDTWNNFMLPLVALQSPDKQILQLVLRSLSGATATPWNLVMT 246

Query: 250 GAAIATIPTLIVFIVLQRYIVRGVMLAGLKG 280
           G+ +A +P LI FI   + ++  +    +KG
Sbjct: 247 GSFLAIVPLLIAFIFSSKQMMESLTRGAVKG 277