Pairwise Alignments

Query, 280 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 272 a.a., carbohydrate ABC transporter permease from Serratia liquefaciens MT49

 Score =  195 bits (495), Expect = 1e-54
 Identities = 95/267 (35%), Positives = 155/267 (58%), Gaps = 2/267 (0%)

Query: 16  RIVAWTLLFIGGLIMVSPLLFMFATSFKTADQVYD--LRLIPAAPTIANYMTVMADGRFL 73
           R + +  + +  L  V P ++M  TS KT  +     L L+PA P++  Y  +M +  F 
Sbjct: 6   RTLVYLFMVLAALASVVPFIWMLVTSLKTQAESIQIPLTLLPAHPSLQAYGKIMREIPFA 65

Query: 74  RWFFNSTLVAVLVTVSNCFFDSLVGYTLAKFEFRGRYFIFLAILSTLMIPTEMLVIPWYL 133
            ++ NS L             ++  Y  ++  FRGR  +FL  +S LM+P +  +IP +L
Sbjct: 66  DFYLNSLLATFFTVTLQMVIATMAAYGFSRLHFRGRDAVFLVCISILMVPGQAFLIPQFL 125

Query: 134 MSSQLGWLDSYWGIMFPGMMTAFGTFLMKQFFETVPNDFLEAARVDGLNEFQIWWKVALP 193
           +  +LG ++S  G++ PG+ + + TFL++QFF  VP +  EAA +DG + F I+W++ LP
Sbjct: 126 VVQKLGLVNSITGLVLPGIFSIYATFLLRQFFLAVPKEMEEAALIDGYSYFAIFWRIMLP 185

Query: 194 LVTPALSALAIFTFLGNWTAFFWPLIVTTSKELYTLPVGLSSFAVEQQIQWEMIMTGAAI 253
           L+ P + A  I   L +W    WPLIV T+ E  TLPVGL+S +    +++ ++M GA +
Sbjct: 186 LIRPGIIACIIINGLWSWNNLMWPLIVNTTTEKLTLPVGLASLSSRAGVEYPLLMAGALM 245

Query: 254 ATIPTLIVFIVLQRYIVRGVMLAGLKG 280
           A IP L++FI+ QRY ++G+  AG+KG
Sbjct: 246 AVIPMLMLFILFQRYFIQGIASAGVKG 272



 Score = 23.5 bits (49), Expect = 0.005
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 5   LPLSHARIRPGRIVAWTLLFIGGLIMVSPLLFMF 38
           LP+  A +     V + LL  G L+ V P+L +F
Sbjct: 221 LPVGLASLSSRAGVEYPLLMAGALMAVIPMLMLF 254