Pairwise Alignments

Query, 280 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 297 a.a., carbohydrate ABC transporter permease from Dickeya dianthicola 67-19

 Score =  145 bits (366), Expect = 1e-39
 Identities = 74/272 (27%), Positives = 148/272 (54%), Gaps = 5/272 (1%)

Query: 13  RPGRIVAWTLLFIGGLIMVSPLLFMFATSFKTADQVY--DLRLIPAAPTIANYMTVMADG 70
           R   ++   LL + GL+MV P ++M + + KT D+++   L+L+P+ P  +++ TV  + 
Sbjct: 25  RGREVLKHLLLMVSGLLMVFPFVWMLSGALKTNDEIFRHPLQLLPSHPDFSSFATVWRET 84

Query: 71  RFLRWFFNSTLVAVLVTVSNCFFDSLVGYTLAKFEFRGRYFIFLAILSTLMIPTEMLVIP 130
            F  + +NS  VA+L ++       L  Y + ++  +    ++  +++  M+P  +  IP
Sbjct: 85  HFGLFMYNSLTVALLTSLLVVVNSVLFAYAIVQWRGKAGRLLYGVVMACYMLPGAVTYIP 144

Query: 131 WYLMSSQLGWLDSYWGIMFPGMMTAFGTFLMKQFFETVPNDFLEAARVDGLNEFQIWWKV 190
            Y++ ++L  LD++ G++F   ++A G F + Q  + +    +EAAR+DG  E+ +   +
Sbjct: 145 CYIILAKLHVLDTHIGLIFSNAVSAMGVFYLHQALKKIHPSLMEAARIDGAGEWALLRTI 204

Query: 191 ALPLVTPALSALAIFTFLGNWTAFFWPLIVTTSKELYTLPVGLSSFAV---EQQIQWEMI 247
            LP + P L+ L +  F+ ++ ++ WP +V TS  L  + +G+  + +   +    W  I
Sbjct: 205 VLPQIKPVLATLFLLIFITHYNSYMWPSLVITSPSLNLISIGIRQYFISGGDYGFNWSNI 264

Query: 248 MTGAAIATIPTLIVFIVLQRYIVRGVMLAGLK 279
           M  +AI  +P L +F++ QR I+ G    G+K
Sbjct: 265 MAASAIVVMPMLFLFLLCQRIILSGFSDTGVK 296