Pairwise Alignments

Query, 346 a.a., sugar ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 357 a.a., Diacetylchitobiose uptake system ATP-binding protein MsiK from Xanthobacter sp. DMC5

 Score =  325 bits (834), Expect = 8e-94
 Identities = 183/355 (51%), Positives = 222/355 (62%), Gaps = 18/355 (5%)

Query: 1   MATIELNQLVKRYGKVEAVKGIDLAIEDGEFVVFVGPSGCGKSTTLRMIAGLEEISDGTL 60
           MAT+++  + K YG  + + G+D+ I DGEFVV VGPSGCGKST LRMIAGLE IS G +
Sbjct: 1   MATVDIRGVKKAYGSTQVIHGVDVDIRDGEFVVLVGPSGCGKSTLLRMIAGLENISGGEI 60

Query: 61  KIAGNVVNEKEPKQRNIAMVFQNYAIYPHMTVRQNIGFGLYTAKLDKTEKNRRIEEAGRV 120
            I   V+NE  PK+R+IAMVFQNYA+YPHMTV  N+GF L   K  K+E   R++ A  +
Sbjct: 61  LIGNRVINEMPPKERDIAMVFQNYALYPHMTVADNMGFSLKLRKAPKSEIESRVQRAAEI 120

Query: 121 LGLEALLDRRPAALSGGQRQRVAIGRAMVRDPAAFLFDEPLSNLDAQLRSQMRIEIKRLH 180
           L L  LLDR P  LSGGQRQRVA+GRA+VRDP  FLFDEPLSNLDAQLR QMR EIK LH
Sbjct: 121 LNLTKLLDRYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAQLRVQMRTEIKELH 180

Query: 181 QRLKTTTVYVTHDQVEAMTMADRIVVMKDGHILQVGTPTELYETPVDIFTARFIGSPSMN 240
           QRLKTTTVYVTHDQ+EAMTMAD+IVVM DG + Q+G P +LY+ P + F A FIGSPSMN
Sbjct: 181 QRLKTTTVYVTHDQIEAMTMADKIVVMHDGIVEQIGAPLDLYDRPANQFVAGFIGSPSMN 240

Query: 241 LLRGSRTTNSVAPSAAGDLLVGVRPHDLLVGESQAQQGVFTLE------------GTVTA 288
            ++G +      P    D  V V P     G S  Q+ V+ L               V  
Sbjct: 241 FVKG-KVRLGANPMLVTDSGVEV-PLPDAQGLSDGQKVVYGLRPEHIRLDPAGVPAQVVV 298

Query: 289 VEPLGPETLVHL----DTDTTSVIATARGKSIPAVGSRLQCQAEAGALYLFDAKT 339
            EP G E LV        D   +    R +   + G  ++   + G  +LFD  T
Sbjct: 299 TEPTGSEILVVARLGEGGDAQEITCLFRERLSFSPGEVIRIAPQPGLTHLFDEAT 353