Pairwise Alignments

Query, 317 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 315 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein from Pseudomonas putida KT2440

 Score =  302 bits (774), Expect = 6e-87
 Identities = 152/307 (49%), Positives = 206/307 (67%), Gaps = 6/307 (1%)

Query: 15  ILSVAAFSTPL--QAADDAACRTIRLSDPGWTDITATNGVASVLLDALGYEADVKTLSVP 72
           +L VA  S PL  QAA+   C+T+R SD GWTDIT T    SV+L+ALGY+     +SVP
Sbjct: 7   LLLVALLSAPLLAQAAEPEQCQTVRFSDVGWTDITVTTATTSVVLEALGYKTHTTMISVP 66

Query: 73  IGYQAMKNG-EIDVFLGNWMPAQKSFVDDLNAAKAAEVMTKNLEGAKFTLAVPAYMAEKG 131
           + Y+++  G ++DVFLGNWMP  ++ +     A   E +  NLE AK+TLAVP  + +KG
Sbjct: 67  VTYKSLATGKDLDVFLGNWMPTMENDIKQYRDAGTVETVRANLENAKYTLAVPQALYDKG 126

Query: 132 VKDFADLAKHADEFESKIYGIEPGAPANQNIQKIIDANDFGLK--GWQLVESGEQAMLAQ 189
           +KDF+D+ K   E + KIYGIEPG   N+ IQ +ID N FGLK  G+++V+S E  ML+Q
Sbjct: 127 LKDFSDIPKFKKELDGKIYGIEPGNDGNRTIQSMIDKNAFGLKDAGFKIVQSSEAGMLSQ 186

Query: 190 VERAGRDKKAVVFLAWAPHPMNEKIDIAYLSGGDAYFGPNFGGAEVYTLARTGWPQQCPN 249
           V+RA +  +A+VFL W PHPMN +  + YL+GGD +FGP+FG A V T  R G+ Q+C N
Sbjct: 187 VDRAQKRGEALVFLGWEPHPMNTRFKMQYLTGGDDFFGPDFGKATVLTNTRKGYTQECSN 246

Query: 250 AATLFKNLKFDIGMENSLMGSILGGE-DSKAAAAAWLKANPKALDGWLQGVTTLDGKPGA 308
              L KNL F++  E+++MG +L  +   +AAA  W+K NP  LD WL GVTT+DGKPG 
Sbjct: 247 VGQLLKNLSFELKDESTMMGYVLDDKMKPEAAAKKWIKDNPGKLDAWLAGVTTVDGKPGL 306

Query: 309 DAVKGKL 315
           +AVK KL
Sbjct: 307 EAVKAKL 313