Pairwise Alignments

Query, 317 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 307 a.a., putative choline betaine-binding protein from Pseudomonas putida KT2440

 Score =  322 bits (824), Expect = 9e-93
 Identities = 160/311 (51%), Positives = 219/311 (70%), Gaps = 6/311 (1%)

Query: 7   LHRIAAGLILSVAAFSTPLQAAD-DAACRTIRLSDPGWTDITATNGVASVLLDALGYEAD 65
           +H+ +A  + ++A  +T   AAD DA C T++++DPGW+DI +TN VA +LL++LGY+  
Sbjct: 1   MHKFSAA-VFALALSATTAHAADSDAQCSTVKMADPGWSDIASTNAVARLLLESLGYQVK 59

Query: 66  VKTLSVPIGYQAMKNGEIDVFLGNWMPAQKSFVDDLNAAKAAEVMTKNLEGAKFTLAVPA 125
           + +L+VPI Y  +K+G++D FLGNWMPAQ+ F D   A    + +++NLEG +FTLAVP 
Sbjct: 60  IDSLAVPIIYGGLKDGQVDAFLGNWMPAQQGFHDKFIANGDVQQLSRNLEGTEFTLAVPD 119

Query: 126 YMAEKGVKDFADLAKHADEFESKIYGIEPGAPANQNIQKIIDANDFGLKGWQLVESGEQA 185
           Y+   GVKDFADL KHA +F+ K+YGI  GAPAN +++ IID N+F L  W+LVES EQA
Sbjct: 120 YVWNAGVKDFADLQKHAGQFDKKLYGIGSGAPANLSLKAIIDKNEFNLGQWKLVESSEQA 179

Query: 186 MLAQVERAGRDKKAVVFLAWAPHPMNEKIDIAYLSGGDAYFGPNFGGAEVYTLARTGWPQ 245
           MLAQV+RA + ++ + FL W PHPMN K+ + YL+GG+ +FG      EVYTL R G+PQ
Sbjct: 180 MLAQVDRAVKKQQFITFLGWTPHPMNVKLKMHYLTGGEKWFGSK---GEVYTLTRKGYPQ 236

Query: 246 QCPNAATLFKNLKFDIGMENSLMGSILGGEDS-KAAAAAWLKANPKALDGWLQGVTTLDG 304
            CPNAA L  NLKF + MENS+M  ++  + S   AA AW+KA+P+ LDGWL GVTT   
Sbjct: 237 ACPNAAKLLGNLKFTLDMENSIMAEVVDKKISFDEAAKAWVKAHPERLDGWLAGVTTKAD 296

Query: 305 KPGADAVKGKL 315
               +AVK KL
Sbjct: 297 GDALEAVKAKL 307