Pairwise Alignments

Query, 385 a.a., nolF secretion protein from Agrobacterium fabrum C58

Subject, 388 a.a., Multidrug resistance protein MdtA from Xanthobacter sp. DMC5

 Score = 97.1 bits (240), Expect = 8e-25
 Identities = 92/373 (24%), Positives = 166/373 (44%), Gaps = 22/373 (5%)

Query: 22  VVTALDPARGSVDAKERVKGIVAAAAMSPAGIPFELAAQEIATIGTRPMAERLSISGE-- 79
           V++++    G++  ++ + G  A A+   A  P       I  I T    E + + GE  
Sbjct: 7   VISSIVVVAGALAWQQGLIGAAAQASKPKAPPP------PIPVIATAVKTEDVPVYGEGI 60

Query: 80  --LQPVNRVLIRAREAGKILEMNVREGQAVRAGDMLVRFETDELQSTLLLRQSDRDAAEA 137
             +Q  N + ++ R  G++ ++  +EGQ V+AGD+L + +     + L   ++ R   EA
Sbjct: 61  GTVQASNTITVKVRVDGELTKVVFKEGQEVKAGDILAQIDQRPFAAALAQAKAARAKDEA 120

Query: 138 ELMLAMQALARTEQLAAKNIASTEQLDKAKSDVVVKTTRVQSLSSQVDIARLALRNAEIR 197
            L  A     R + L  K  AS +QLD   + V     ++    + +D A++ L    IR
Sbjct: 121 LLANAKADYDRYKVLVPKQAASQQQLDTQSALVAQYQAQISGDEAAIDNAQIQLDYTTIR 180

Query: 198 APFDGTVTRRVAETGARIGA-DGELLTLVDTSELEAKVLVATRD-----IPRVARGQTAE 251
           AP  G    R+ + G  + A DG  L ++   +  A V    +D        +ARG  + 
Sbjct: 181 APISGRTGVRLVDEGNIVHANDGGGLVVITQLKPVAVVFTLPQDRLDDMQAALARGPVSA 240

Query: 252 LEI--DGLAGQIVKGTVERISPVAEDGTRVVAVYLRLANRDGQLWGGMFAGGSILLREKN 309
           L    DG+  ++ +GTV  I       T  + +     N D +LW G F    +LL   +
Sbjct: 241 LAFRRDGVT-EVGEGTVALIDNQISSDTGTLRIKAVFPNDDLKLWPGAFVNVKVLLDTHH 299

Query: 310 DALVVPAIALRKDETGYHVLKIQ-DGHLRRQTVAVGPRWNGGSLIEIGAGLADGETILTV 368
           + + +PA A+++   G++V  ++ D  + ++ V       G  +  I  GL  G+ ++  
Sbjct: 300 NVITIPAQAIQRGPDGFYVYVVKPDATVEKRAVTTSGISAG--IASIATGLVAGDQVVID 357

Query: 369 PLPELRPDMAVTI 381
              +L P   VT+
Sbjct: 358 GQYKLIPGARVTV 370