Pairwise Alignments

Query, 385 a.a., nolF secretion protein from Agrobacterium fabrum C58

Subject, 374 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

 Score =  104 bits (259), Expect = 5e-27
 Identities = 84/299 (28%), Positives = 138/299 (46%), Gaps = 25/299 (8%)

Query: 78  GELQPVNRVLIRAREAGKILEMNVREGQAVRAGDMLVRFETDELQSTLLLRQSDRDAAEA 137
           G LQ VN V I    AG +  ++   GQ V+ G +LV+ +TD       +   D  +A+A
Sbjct: 63  GTLQAVNGVDISGSVAGLVKAISFESGQDVKRGQVLVQLDTD-------VEMGDLRSAQA 115

Query: 138 ELMLAMQALARTEQLAAKNIASTEQLDKAKSDVVVKTTRVQSLSSQVDIARLALRNAEIR 197
           EL LA  +  R  +L   +  S   L+K ++++ VK  +V  L +Q+           I 
Sbjct: 116 ELGLAKTSHDRNMKLVRSDTVSVAALEKTEAELKVKQAKVGGLQAQI-------AKKTIA 168

Query: 198 APFDGTVTRRVAETGARIGADGELLTLVDTSELEAKVLVATRDIPRVARGQTAELEIDGL 257
           APFDG +  R  + G  +     ++ L D S +     V+ +D+  +  GQT  +  D  
Sbjct: 169 APFDGRLGVRKIDLGQYVQPGQMVVNLQDLSLMLCDFTVSQKDLSLLGIGQTVRMTTDAW 228

Query: 258 AGQIVKGTVERISPVAEDGTRVVAVYLRLANRDGQLWGGMFAGGSILLREKNDALVVPAI 317
            G   +G V  I P+ +  T +V+V  R  N +G+L  GMFA   I        + VP  
Sbjct: 229 PGVTFEGQVAAIEPLVDAKTGMVSVQARFPNAEGRLRPGMFARIEIERPAGAPVVTVPGS 288

Query: 318 ALRKDETGYHVLKIQD---------GHLRRQTVAVGPRWNGGSLIEIGAGLADGETILT 367
           A+  +  G  V  +++             R  V++G R +G  L+ I +G+A G+ ++T
Sbjct: 289 AVAYNLHGDAVFVVKEEAGADGKTVSKAERVVVSLGERKDG--LVVIKSGVAAGDVVVT 345