Pairwise Alignments

Query, 1048 a.a., AcrB/AcrD/AcrF family protein from Agrobacterium fabrum C58

Subject, 1032 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

 Score =  528 bits (1361), Expect = e-154
 Identities = 319/1033 (30%), Positives = 561/1033 (54%), Gaps = 23/1033 (2%)

Query: 1    MFLTRISVNHPVFATMMMVALLVMGAFSLQRLGLDQYPNVDVPVVVVVTSYPGATPETVE 60
            M L+R+ +  PV  T+ M+A+++ G  + + L +   P VD P + V+T YPGA+P+ + 
Sbjct: 1    MNLSRLFILRPVATTLSMLAIVLAGLIAYKLLPVSALPQVDYPTIRVMTLYPGASPQVMT 60

Query: 61   MEVTRPVEDALNAIGGLDEVTSTSYEGRSVVVAKFKLEVQSSAAAQEVRDKIAAIEANFP 120
              VT P+E     + GL+++ STS  G SV+  +F L++    A Q+V+  I A     P
Sbjct: 61   SAVTAPLERQFGQMPGLEQMASTSSGGASVLTLRFNLDMNMDVAEQQVQAAINAASNLLP 120

Query: 121  EDTKKP-VISRFDPAAEPILSLAISSTSLDVPALATLAEQKVVRQLTTVAGIGQATLVGG 179
             D   P V ++ +PA  P+L+LAISS ++ +P L  L + +V ++L  ++G+G  ++ GG
Sbjct: 121  SDLPAPPVYNKVNPADTPVLTLAISSKTMPLPKLNDLVDTRVAQKLAQISGVGMVSIAGG 180

Query: 180  RKRQIDVTIDETRMRALGIGVNEVVTALRAGNSNSPAGSVVDPVSERTIQIQSRIEEPEA 239
            +++ + + ++   + A G+ +++V T + A N N P G+   P     +    ++  PE 
Sbjct: 181  QRQAVRIKVNVDALAANGLNLDDVRTLIGASNVNQPKGNFDGPTRVSMLDANDQLRSPEE 240

Query: 240  LLDMVVARRGGVAILLRDVATLSEGAADAENRAIYNGQTALAIDIVKVQDANTVQVVSDV 299
              ++++A   G  + L+DVA + +GA +    A  N   A+ ++I +   AN ++VV  +
Sbjct: 241  YANLILAYNNGAPLRLKDVAEIVDGAENERLAAWANENHAVLLNIQRQPGANVIEVVDRI 300

Query: 300  RKRLDALNAELSPQNIQLRIVTDSSIPIQESVTQVQTTLIEGAALAVAIVFLFLNSWRST 359
            +  L ++   L P  + + ++TD +  I+ +V  VQ  L+    L V + F+FL  + +T
Sbjct: 301  KGLLPSITDNL-PAGLDVSVLTDRTQTIRAAVKDVQHELLIAIVLVVMVTFVFLRRFSAT 359

Query: 360  VITGLTLPIAIIGTLTVVDFLGFTLNTLSLLALTLSIGILVDDAIVVRENITRHLHMGKS 419
            +I  + +P+++IGT  V+   GF++N L+L+ALT++ G +VDDAIV+ ENI+RH+  G++
Sbjct: 360  LIPSIAVPLSLIGTFGVMYLAGFSVNNLTLMALTIATGFVVDDAIVMLENISRHIEEGET 419

Query: 420  HLRAALDGTGEIGLAVIATTATIVAVFLPVAFMDGIVGRFFYQFGVTVSAAVLISLFVAF 479
             ++AAL G  +IG  +I+ T +++AV +P+ FM  +VGR F +F +T++ A+LISL V+ 
Sbjct: 420  PMQAALKGARQIGFTLISLTFSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVSL 479

Query: 480  TLDPMLSSVWYDPDAQADAKRGPIGRLIARFDHGFEWMAGQYRHAIDWTLRHRLVTLLVT 539
            TL PM+ +       + + K    GR         +W+   Y  A+ W L+H+ +TLLV 
Sbjct: 480  TLTPMMCARL----LKREPKEEEQGRFYRASGAWIDWLIQHYGSALQWVLKHQPLTLLVA 535

Query: 540  AGIFIGSLFMVPLVGTEFVPDADEGRFQINLTAPVGSSLDYTTAKLQQVKKALREFPEVE 599
                + ++F+  +V   F P  D G  Q    AP  +S    + + Q + K + + P V+
Sbjct: 536  VASLVLTVFLYMVVPKGFFPVQDTGVIQGISEAPQSTSFAAMSERQQALSKVILQDPAVQ 595

Query: 600  MLYSTINT-GGAAGKHRAAILVGLVPLSAREQTPLSLAEPVRKRLSAIPGIE-----INI 653
             L S I   G  A  +   +L+ L P   R+ +   +   ++ ++  + GI      +  
Sbjct: 596  SLSSYIGVDGDNATLNSGRLLINLKPHGERDVSASEVISRLQPQVDRLVGIRLFMQPVQD 655

Query: 654  LQNGLGGGESPVQLSILGDDRAVLEKIANGLVEDMKKIPGLVEVTSSTKDVTSILSVRLK 713
            L        +  Q S+   D  +L + +  LV+ +++ P L +V S  +D    + + + 
Sbjct: 656  LSIEDRVSRTQYQFSLSSPDADLLAQWSGKLVQALQQRPELADVASDLQDKGLQVYLVID 715

Query: 714  PAAASDLGIARADLAAALSALIGGEDVSK-WTDAHGNSYDIVVRLPVERRSDAARLGELM 772
               AS LGI+ + +  AL    G   +S  +T A  + Y +V+     + SDAA +G   
Sbjct: 716  RDMASRLGISVSQITNALYDAFGQRQISTIYTQA--SQYRVVL-----QSSDAATIGPQA 768

Query: 773  ITTGRTGANGAPLMVRLDQVADIGTVAAPAEIRRFDNRREILVSANIT-GRTLGDVTETL 831
            + +    A      VRL  +A I    A   I        + +S N+  G +LG+  + +
Sbjct: 769  LESIHVKATDGG-QVRLSALARIEQRQAQLAISHIGQFPAVTLSFNLAHGASLGEAVQVI 827

Query: 832  QGLTASRDLPAGYRIRFGGEAETMQETVGHMGTALSMAIIFIYIVLASQFGSFLQPLAIM 891
            + +     +P G + RF G AE  Q ++      +  A++ +YIVL   + S++ P+ I+
Sbjct: 828  EQVQKDIGMPLGVQTRFQGAAEAFQASLSSTLLLILAAVVTMYIVLGVLYESYIHPITIL 887

Query: 892  VSLPLSLIGVLLGLMVAGSTINMFSLIGFIMLMGLVTKNGILLVDFA-NRERRRGLTLNE 950
             +LP + +G LL L+++G+ + M ++IG I+L+G+V KN I+++DFA   ER +G++  +
Sbjct: 888  STLPSAAVGALLALLISGNDLGMIAIIGIILLIGIVKKNAIMMIDFALEAERNQGMSPRD 947

Query: 951  ALANAGVIRFRPIIMTTLAMIFGMIPLGLAVGGGGAQRAPMAHAVVGGLISSTLLTLIVV 1010
            A+  A ++RFRPI+MTTLA +FG +PL LA G G   R P+   +VGGL+ S +LTL   
Sbjct: 948  AIYQAALLRFRPILMTTLAALFGAVPLMLATGSGAELRQPLGLVMVGGLLVSQVLTLFTT 1007

Query: 1011 PVILSYIDSITRR 1023
            PVI  Y D + RR
Sbjct: 1008 PVIYLYFDRLARR 1020