Pairwise Alignments

Query, 771 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 532 a.a., ATP-dependent DNA ligase (EC 6.5.1.1) LigC from Sphingobium sp. HT1-2

 Score = 57.0 bits (136), Expect = 3e-12
 Identities = 96/353 (27%), Positives = 142/353 (40%), Gaps = 67/353 (18%)

Query: 222 QALPSFVPPALA-TLKPKPPEGSRWLHEIKFDGYRLQARVDQGKLQLLTRSGLDWTEKFG 280
           +  P F P  LA  L+    + + +  E K+DG R+Q      + +L +R+G D T  F 
Sbjct: 199 EGTPYFRPFMLAHPLEADSVDLADYAAEWKWDGIRIQIVGTGRETRLYSRAGDDITGSF- 257

Query: 281 AAVAAALTALPAETVLIDGEIVV--------ERDSGASDFSALQQDLSEG-------RDD 325
             +A A T       ++DGE++V        E    A+ F+ALQQ L           D 
Sbjct: 258 PEIAQAFTG----HAVLDGELLVKGEFQGAKEHGGAAASFNALQQRLGRKAVSAKMMADY 313

Query: 326 RFVFYAFDLLYLDGSDLRGAALSERKALLEKLLPAGDPHLRYSQHFEESGAL-------- 377
                 +DLL     DLR    ++R+A LE  +    P       F+ S  +        
Sbjct: 314 PAFVRLYDLLIEGDDDLRALPWTQRRARLEAYMAQLSP-----DRFDLSAVIDAPDFAAL 368

Query: 378 --VLDHACRLSLEGVISKVKSSKYVSGRKGE-WVKSK-------CSMRQEFVIGGYTVSS 427
             +   A   ++EGV+ K + S YV+GRK   W K K       C M       G   S 
Sbjct: 369 ADIRAGARDAAIEGVMLKRRDSPYVAGRKAALWYKWKRDPLTADCVMMYAQRGHGKRSSF 428

Query: 428 TSEHAIGSLALGVYENGKLRHVGRVGTGYSGDVAEMIFSRLKPLERKDSPFGDKLTALAR 487
            S++  G       E+G+L  VG+  +G++ +        LK L+R    F    T    
Sbjct: 429 YSDYTFGCWT----EDGELLPVGKAYSGFTDE-------ELKWLDR----FVRGNTVNRF 473

Query: 488 RDLHFVKPELVAEVEF-------RAWSGDGNLRHASFRGLREDKPAGEIEREE 533
             +  V+  LV EV F       R  SG   +R      +R DKPA E +  E
Sbjct: 474 GPVREVEKTLVLEVAFDSIHDSKRHKSGLA-MRFPRIARIRRDKPAAEADTVE 525