Pairwise Alignments

Query, 779 a.a., diguanylate cyclase from Agrobacterium fabrum C58

Subject, 904 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  351 bits (901), Expect = e-101
 Identities = 232/614 (37%), Positives = 323/614 (52%), Gaps = 53/614 (8%)

Query: 212 RLIMIGAISGVTFLILFATAVAALVDRYLVD---------LKGLVDATLDGLAVVR-DGR 261
           RL    A+ G          + AL  R  VD         L   V+A  DG A+   D R
Sbjct: 275 RLAAAAALGGTLVAAFAGALLIALRQREKVDSERARATAVLANAVEAMSDGFALWDGDDR 334

Query: 262 IVELNTRFAGLLGREEASLV-GRNPDDLFKA-VDGQPTYLSRPAPVEAIRERGGQAQVFE 319
           +V  N R+  +       L+ G    D+ +A    Q   L  P   EA+ ER    +   
Sbjct: 335 LVACNQRYREMFAITAPFLIPGARFQDIMRASTHAQQLPLPGPVTEEAVAERERWHRPEN 394

Query: 320 LGVRTIEYRGR----------PCEVMAIR-DLTEKR------------------EAQRE- 349
             V      GR             V+AIR D+T  +                  EAQR+ 
Sbjct: 395 SPVERQMSTGRWVLMTDRRTADGGVVAIRTDITALKAVQAELAEANLRATEAAAEAQRQN 454

Query: 350 ---------IEYLARHDVLTGLSNRTMFQTRLHQQIDNGDE-EDEFALLALDLDRFKAVN 399
                    I +LA HD LTGL NR +F+ R+ + +    E   + ALL LDLDRFK VN
Sbjct: 455 MVLIEREGRIRFLAHHDDLTGLPNRVVFRERIGKSLHQAAELGQKMALLYLDLDRFKDVN 514

Query: 400 DIFGHAEGDRVLKKVAAILDECARAGDVVARLGGDEFVILTARHTKADEARLLAETILGM 459
           D  GH  GD +L+ VAA L  C +A   VARL GDEF I++    + + A  LA  I+ +
Sbjct: 515 DTLGHPVGDALLRTVAARLTNCVQAPGAVARLSGDEFAIISIGSQQPEAATELAGRIIAL 574

Query: 460 FALKMNVVNDPTAVGVSIGIAVFPRDGQDHESIMHAADLALYRAKMGGRGILAFYDPLMD 519
                + +    +V VS+GIAV      D ++++  ADLALYRAK  GRG L  ++P MD
Sbjct: 575 LGEPYSALGHTISVSVSVGIAVAEAAWTDADTLLKQADLALYRAKAWGRGTLCVFEPEMD 634

Query: 520 QEARERRQLETDLRLAINRDELVLNYQPVLSVECGQVVGYEALVRWQHPTRGVVPPDVFI 579
              R R ++E DLR A+ + +  L YQP+ SV  G + G+EAL+RW HP RG+V P +F+
Sbjct: 635 VHLRARLEMEQDLRQALAQGQFELAYQPIFSVVTGALTGFEALLRWNHPRRGLVDPSIFV 694

Query: 580 PIAEESGIIISLGEWVLREACRQASTWAPHLKIAVNVSPLQFSLANLGHVVCTVLMQTGL 639
           P+ E+S  I+ +G + +R+A    +T    LK+AVN+SP+Q +  ++   V   L  +GL
Sbjct: 695 PLTEDSRSIVEIGAFAMRQAVADIATLPGDLKVAVNLSPVQLAFGDIIGTVEAALRDSGL 754

Query: 640 SPNRLELEITEAALLKDRKATLVILNQLKALGVAIVMDDFGTGYSSLSNLQSFPFDKIKI 699
            P RLE EITE AL +  + +L +L +L+ +GV IV+DDFGTGYSSLS L+  P DKIKI
Sbjct: 755 PPERLECEITETALFESEQTSLAVLQRLRDVGVRIVLDDFGTGYSSLSRLRLLPIDKIKI 814

Query: 700 DRSFIAAMSEDDNARAIVRAVIGLGRSLDLPVTAEGIETDAQYRMVVDEGCAQAQGYLFG 759
           DRSF+   +E   + AI+ AV  L   L +   AEGIET+ Q+ ++    CA+AQG+L G
Sbjct: 815 DRSFVLDATEGSASAAIIEAVTVLTGRLGIATVAEGIETEEQWALLARTSCAEAQGFLLG 874

Query: 760 RP-DVAPAPAASTA 772
           RP  +A A A + A
Sbjct: 875 RPLPIAEAAALARA 888