Pairwise Alignments

Query, 779 a.a., diguanylate cyclase from Agrobacterium fabrum C58

Subject, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  340 bits (872), Expect = 1e-97
 Identities = 219/616 (35%), Positives = 323/616 (52%), Gaps = 37/616 (6%)

Query: 178 AAIFGICALHFTAMSATVL---TPDPSMSGPDPDNVGRLIMIGAISGVTFLILFATAVAA 234
           AA++ + ++ + A++  +L   T DP         VGR I +     ++ L+++ + V  
Sbjct: 12  AALYVVLSILWLALAEVMLHSMTDDPLAL-----TVGRQINVVVWVLLSALLIYVSRVRL 66

Query: 235 L-----------VDRYLVDLKGLV-DATLDGLAVV-RDGRIVELNTRFAGLLGREEASLV 281
           L            DR  + +   V D+TL+G+ V  R G IV +N  F  + G ++  ++
Sbjct: 67  LNFIGHGARLRCEDRERLRMAAAVFDSTLEGVLVTDRQGLIVHVNRAFMRITGYQQDEVI 126

Query: 282 GRNPDDLFKAVDGQPTYLSRPAPVEAIRERGGQ-------AQVFELGVRTIEYRGRPCE- 333
           G+ P        G   Y    A +    E  G+        +++         R    E 
Sbjct: 127 GQRPSKFKSGHHGLAFYQEVFATLAEKGEWSGEIWNRRKSGEIYPQWQTICAIRDDEGEL 186

Query: 334 ---VMAIRDLTEKREAQREIEYLARHDVLTGLSNRTMFQTRLHQQIDNGDEEDE-FALLA 389
              V    D++  + +++E+ YLA HD LTGL NR +F  RL Q +          ALL 
Sbjct: 187 SHYVAVFSDISAIKHSEQELAYLAHHDPLTGLPNRLLFTDRLEQALAAAQANKRGCALLL 246

Query: 390 LDLDRFKAVNDIFGHAEGDRVLKKVAAILDECARAGDVVARLGGDEFVILTARHTKADEA 449
           LDLD F+++ND  GH  GD++LK V   L E    G  +ARLGGDEF +L     +  +A
Sbjct: 247 LDLDHFQSINDGLGHTIGDQLLKLVGERLGEVLGNGVTLARLGGDEFGVLVENCQQVGQA 306

Query: 450 RLLAETILGMFALKMNVVNDPTAVGVSIGIAVFPRDGQDHESIMHAADLALYRAKMGGRG 509
             LA+ I+           +   +  S+GI+++P D    E ++  AD ALY+AK  GR 
Sbjct: 307 GKLAQCIIERMREPFQFDGNRLFISASVGISLYPSDALGAEQLLRNADSALYKAKSNGRA 366

Query: 510 ILAFYDPLMDQEARERRQLETDLRLAINRDELVLNYQPVLSVECGQVVGYEALVRWQHPT 569
             A Y   +   A+ R +   +LR A+ +DEL + +QPV  +  G+ VG E LVRWQHP 
Sbjct: 367 CYALYTEELTAHAQHRVETAAELRRALEQDELRVYFQPVHDLASGRQVGVETLVRWQHPR 426

Query: 570 RGVVPPDVFIPIAEESGIIISLGEWVLREACRQASTWAPHLK----IAVNVSPLQFSLAN 625
           RG+VPP  FIPIAE +G+I  +  WVLR+ACRQ   W    +    + VN+S   F    
Sbjct: 427 RGLVPPGEFIPIAERTGLIAEIDTWVLRQACRQMVQWQAQGRQLAFVGVNISSRLFGQHE 486

Query: 626 LGHVVCTVLMQTGLSPNRLELEITEAALLKDRKATLVILNQLKALGVAIVMDDFGTGYSS 685
           L   V  VL  TGL+P  LELE+TE+A+++D +  L  L++L+ LGV + +DDFGTGYSS
Sbjct: 487 LYRQVAEVLHDTGLAPALLELEVTESAVMEDPEVALEQLHRLRELGVTLAIDDFGTGYSS 546

Query: 686 LSNLQSFPFDKIKIDRSFIAAMSEDDNARAIVRAVIGLGRSLDLPVTAEGIETDAQYRMV 745
           L  L+  P  K+KID+ F+A +  D++  AIVR +I L RS+ + V AEGIE   Q   +
Sbjct: 547 LLRLKRLPVQKLKIDQGFVAGLPVDEDDIAIVRVIIALARSMGMQVHAEGIEQAEQASFL 606

Query: 746 VDEGCAQAQGYLFGRP 761
           + E C   QGY FGRP
Sbjct: 607 LQEECQLGQGYWFGRP 622