Pairwise Alignments

Query, 342 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 340 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  336 bits (861), Expect = 6e-97
 Identities = 164/325 (50%), Positives = 224/325 (68%)

Query: 14  LQLIVSLFILLCITFIIGRVMPTDPVGAIVGELADPKAYEAMRARLGLDLPLYQQFFIYL 73
           L   + L +LL +TF+IG+  P DPV  +VG+ A P+AY+  R R+GLD P+  QF  Y+
Sbjct: 15  LSFALMLLVLLLVTFLIGKAAPIDPVLQVVGDRASPEAYQEARQRMGLDQPIATQFVRYV 74

Query: 74  RGLLHGDFGIAILTGNPVTRDLAQAFPATFELATLAIIISTIIGVPLGLAAALFRDTFID 133
                GD G +  TG  V  DL Q FPAT ELATL I++  + GVPLG+ AA   + +ID
Sbjct: 75  ADAAKGDLGRSTTTGRAVLEDLRQYFPATLELATLGILLGVVFGVPLGMLAAHQHNRWID 134

Query: 134 KFARVFALVGHSIPVFWFGIVGLVIFYASFNLVGGPGRVDVFYEGIVEPKTGLMLVDSLL 193
           +  R+  L+G+S+PVFW G+VGL+IFYA    VGGPGR+D  Y+  V+  + L+LVD+L 
Sbjct: 135 QLLRLVGLLGYSVPVFWLGLVGLLIFYARLGWVGGPGRLDDIYQYTVDSWSNLVLVDTLR 194

Query: 194 AGETEIFWNALSHIILPAIILAYMAMAYITRMTRAFTLEQLSQDYVIAARAKGVSPTRTI 253
           AG  E F N LSH++LPA +L Y ++AYI+RMTRAF LE+L ++YV+ AR KG S  + +
Sbjct: 195 AGNGEAFRNGLSHLVLPAALLGYFSLAYISRMTRAFFLEELGKEYVLTARVKGASELQVL 254

Query: 254 TRHVLPNIAVQLITVLAISYGNLLEGAVVTEIVFSWPGIGQYMTNALLIGDMNAILAATI 313
            RHVLPN+A  L+TV+A+SY  LLEGAV+TE VFSWPGIG Y+TNAL   D+ A+L  T+
Sbjct: 255 VRHVLPNVAAPLVTVIALSYAVLLEGAVLTETVFSWPGIGLYVTNALFSADVAAVLGGTL 314

Query: 314 VIGFIFMLLNFLADLAYTTLDPRTR 338
           ++G  F++LN  +D+    +DPR R
Sbjct: 315 LVGLCFVVLNTASDVLGYLMDPRAR 339