Pairwise Alignments

Query, 342 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 316 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  183 bits (465), Expect = 4e-51
 Identities = 105/334 (31%), Positives = 179/334 (53%), Gaps = 28/334 (8%)

Query: 12  RFLQLIVSLFILLCITFIIGRVMPTDPVGAIVGELADPKAYEAMRARLGLDLPLYQQFFI 71
           R + LI++LF +  I +++  ++P DP   ++G  A P    A++ ++GLD PL  ++  
Sbjct: 8   RLVSLIITLFAVSLIIYVVMGLLPGDPAAIMLGTSASPDTLAALQKQMGLDQPLPLRYLH 67

Query: 72  YLRGLLHGDFGIAILTGNPVTRDLAQAFPATFELATLAIIISTIIGVPLGLAAALFRDTF 131
           +L G+  GD G +   G PV   + +    T  LA LAI +S  I +PLG+AAA  R+  
Sbjct: 68  WLAGVFRGDLGQSYTYGVPVAGLIIERLAVTLPLALLAIFLSVTIAIPLGVAAAQNRNGA 127

Query: 132 IDKFARVFALVGHSIPVFWFGIVGLVIFYASFNLV---GGPGRVDVFYEGIVEPKTGLML 188
           +D  A +F+ VG ++P FW G++ +++F  +   +   G PG    F  G+V        
Sbjct: 128 LDFAAGLFSHVGIAVPGFWVGLLLIIVFSTTLGWMPSGGFPGWSPSFSAGLVA------- 180

Query: 189 VDSLLAGETEIFWNALSHIILPAIILAYMAMAYITRMTRAFTLEQLSQDYVIAARAKGVS 248
                             ++LPAI LA      +TR+ R+  LE +++D+V  ARAKG+S
Sbjct: 181 ------------------LVLPAIALALSQAGVLTRVCRSAVLEVMNEDFVRTARAKGLS 222

Query: 249 PTRTITRHVLPNIAVQLITVLAISYGNLLEGAVVTEIVFSWPGIGQYMTNALLIGDMNAI 308
               + RH +PN  + ++T++ + +  L+ GAV+ E VF+ PG+G+    AL   D+  +
Sbjct: 223 ERVALWRHAVPNAMIPVVTMIGLQFTFLIAGAVLVENVFNLPGLGRLAYQALTQRDIVVM 282

Query: 309 LAATIVIGFIFMLLNFLADLAYTTLDPRTREVAR 342
            +  +    + +++NF+ D+AY  +DPR R  AR
Sbjct: 283 QSVVLFFSALVIIMNFVVDIAYLFIDPRLRAGAR 316