Pairwise Alignments

Query, 309 a.a., IS3 family transposase from Agrobacterium fabrum C58

Subject, 281 a.a., IS3 family transposase from Magnetospirillum magneticum AMB-1

 Score = 70.5 bits (171), Expect = 4e-17
 Identities = 75/270 (27%), Positives = 113/270 (41%), Gaps = 11/270 (4%)

Query: 20  LSERRACQIISADRKMIRYRSCRPPEVELRL-RLRDLAN-ERRRFGYRRLFILLRRDGEP 77
           LS    C ++S  R    Y      E  L L RL D    E   +G R++   L+ +G P
Sbjct: 9   LSIGAQCHLLSIARSSFYYEPLGETEANLELMRLIDRQFLETPFYGVRQMAWHLQNEGHP 68

Query: 78  SGVNRIYRLYREEGLS--VRKRKARRRAVGTRA-PILVEA----KANARWSLDFVHDQFA 130
             V R+ RL R  GL    +K    + A G +  P L+      + N  W  D  +    
Sbjct: 69  VNVKRVRRLMRLMGLMPIYQKPNTSKPAKGHKTYPYLLRGLRIDRPNQVWCADITYLPMR 128

Query: 131 CGRRFRVLNIVDDVTRECLAAIPDTSISGRRVARELTALIPRRGKPGVIVSDNGTELTSN 190
            G  + ++ I+D  TR+ LA     ++        L   I R G P ++ +D G++ TS 
Sbjct: 129 RGFLY-LIAIMDWATRKVLAWRISNTLEADFCVEVLNEAILRFGPPEIMNTDQGSQFTSF 187

Query: 191 AILAWSKDHKVDWHYIAPGRPMQNGYVESFNGRMRDELLNESLFFGLDHARSAIAEWADD 250
           A +   K           GR + N ++E     ++ E +    +     AR+ I  W   
Sbjct: 188 AWIDRLKRAGTRISMDGKGRCIDNVFIERLWRSLKYECVYLHAWETGSQARAGIGPWITF 247

Query: 251 YNHFRPHSSLGYQTPA-AYAGTIAATGSNA 279
           YNH RPH++ G +TPA  Y  TI  T   A
Sbjct: 248 YNHKRPHAAHGGRTPAVVYWNTINQTDQQA 277