Pairwise Alignments

Query, 267 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 267 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  163 bits (412), Expect = 4e-45
 Identities = 88/244 (36%), Positives = 145/244 (59%), Gaps = 7/244 (2%)

Query: 19  LVGAGI--VWEIAVRALKVPEYILPAPSRVFADLYNNVPVVFTASLYTLQPMVLGFLVAV 76
           LVGA +  VW++A  A KVP Y++P+P+ +   L  + P++  A   TL+   L F +AV
Sbjct: 22  LVGALLLGVWQLACIAWKVPVYLVPSPADIGRTLVADGPMLLGALWMTLKITFLSFALAV 81

Query: 77  VMGTLLALLVVYSRAFEAIFYPLLVILQIIPKIAIAPLFIIWVGFGLPSKILLVFLLSFF 136
           V+GTL A + V SR  EA  +P  ++LQ+ P +AIAPL IIW      + ++   L++ F
Sbjct: 82  VIGTLAAFVFVQSRVVEASLFPYAILLQVTPVVAIAPLIIIWCSDTTLALVICATLVAIF 141

Query: 137 PIVVNSIVAFKSIEPDVYDLAKSYRAGRLKIFWKVELPGALPSLFAGFKVAAALSATAAV 196
           PI+ N+++  +S+ P + +L    RA R ++  ++ +P ALP  FAG ++A+ L+   AV
Sbjct: 142 PIIANTVLGLRSVNPGLLNLFHLNRASRWQVLLRLRIPSALPCFFAGLRIASGLALIGAV 201

Query: 197 VAEFVASDNGLG----YLLLNYNGNMNTSMTFAVIIVLSLLGLLLYGIVELIERFAI-PW 251
           VAEFVA   G G    Y +L     +N    FA +++++L G+ L+ ++ L+ R ++  W
Sbjct: 202 VAEFVAGTGGTGAGLAYQILQAGFQLNIPRLFAALVLIALTGVALFSLMALLARLSLRHW 261

Query: 252 HVSQ 255
           H S+
Sbjct: 262 HESE 265