Pairwise Alignments

Query, 329 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 334 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

 Score =  139 bits (349), Expect = 1e-37
 Identities = 94/328 (28%), Positives = 152/328 (46%), Gaps = 4/328 (1%)

Query: 5   MRKTLT--GSVVALAISLAGIQSAAAEDKVTLRLNFLLSGVHTIFYYGAEKGFYKDAGID 62
           M+K L+  G+   L  S  G+ +A A D ++L LN+  +  H   YY   KG+Y +AGID
Sbjct: 1   MKKLLSAAGATALLMASATGVSTAFAADAMSLMLNWTPTADHAPLYYAKAKGWYSEAGID 60

Query: 63  LQIGEGQGSARTVQSVATGGDMFGIADGGSVIAGASKGAPVKSVLGLLNTSPYAMTFRAD 122
           L I  G+GSA + Q V TGG   GI+D  + I    KGA VK+V+ +   SP    +   
Sbjct: 61  LSIEAGKGSAVSAQRVGTGGSTLGISDLPTTIQAKGKGADVKAVMVIYANSPQGFYWLKS 120

Query: 123 SGVKSIKDVEGKTVAASAGEASLALLPALWKKNGVDASKVNILNVDGPGKIIAIMQDRAA 182
           SG+   KD  G+ +    G+A+  + PA  KK G+D + V  +NV    K +A ++ ++ 
Sbjct: 121 SGINGPKDFAGRKIGNPPGDAARLMWPAFAKKAGLDPASVTFVNVSPQAK-VAALKSKSV 179

Query: 183 GILGGLENQ-VVVLNSKGLKQNVFSFAELGVNTQGLTIITNTKLIDSNQDLVKRFVAASL 241
            I+    N+  +     G      ++ + GVN  G ++I N   +  N   VK+FVA + 
Sbjct: 180 DIISDFYNEHDLKAREFGADLGFQAWRDAGVNVYGNSLIVNGPYLAKNPAQVKKFVAVTQ 239

Query: 242 KSIEAAKADPDAAVAAAVKEKPTGDPKLLKEQLDISLKLLPSPSAPSAPLGEMAAADWQQ 301
           ++ EA   D +  + A         P   ++Q +   +L+   +     LG       + 
Sbjct: 240 RAYEACVKDFEPCLQALTASVSGLSPDNQRDQWNRIKQLMRDDTTTKVALGAFDGQRVKT 299

Query: 302 TLDLMKEYQDIKTDMPAGAFFTNSLIAK 329
             +L+     I         FTN  + K
Sbjct: 300 DYELVSSLIGIDKPYDPATLFTNEFLDK 327