Pairwise Alignments

Query, 329 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 342 a.a., ABC transporter, periplasmic binding component-related protein from Pseudomonas putida KT2440

 Score = 65.9 bits (159), Expect = 1e-15
 Identities = 70/325 (21%), Positives = 125/325 (38%), Gaps = 11/325 (3%)

Query: 5   MRKTLTGSVVALAISLAGIQSAAAEDKVTLRLNFLLSGVHTIFYYGAEKGFYKDAGIDLQ 64
           +R  L  +++   +++A +  A A DKV L  ++        FY     G Y+  G+D+ 
Sbjct: 12  LRSLLAAALLPTTLTIAPL--AIAGDKVVLLTSWYAQAEQGGFYQALADGLYEKEGLDVS 69

Query: 65  IGEGQGSARTVQSVATGGDMFGIADGGSVIAGASKGAPVKSVLGLLNTSPYAMTFRADSG 124
           I  G      +Q + +    F +     ++    +G PV +V       P  +   AD  
Sbjct: 70  IRMGGPQVNGMQLLVSKQADFIVNYDLQILKSVEQGLPVVAVAAPFQGDPQGLMTHAD-- 127

Query: 125 VKSIKDVEGKTVAASAGEASLALLPALWKKNGVDASKVNILNVDGPGKIIAIMQDRAAGI 184
           V  +  + GK V  S         P L  K  +  ++      +    +   + D     
Sbjct: 128 VSGLDALGGKPVLVSTS-GQQTWWPWLKGKYQLADNQARPYTFN----LQPFLADPQTTQ 182

Query: 185 LGGLENQVVVLNSKGLKQNVFSFAELGVNTQGLTIITNTKLIDSNQDLVKRFVAASLKSI 244
                +++      G+  N F FA+ G    G T++T   +I  + + V  FV AS++  
Sbjct: 183 QAYASSELFQAIKAGVTPNFFLFADAGYPPYGSTVVTRQDIIAEHPERVAGFVRASMEGW 242

Query: 245 EAAKADPDAAVAAAVKEKPTGDPKLLKEQLDI--SLKLLPSPSAPSAPLGEMAAADWQQT 302
           +    DP A  A   ++ P    +LL   +      +L+    A +  +G M  + WQ T
Sbjct: 243 KRYLDDPSAGNALIKRDNPNMTDELLAWGVSTLKQYRLVTGGEAATQGIGTMTDSRWQAT 302

Query: 303 LDLMKEYQDIKTDMPAGAFFTNSLI 327
            D M E   +  D P    +T   +
Sbjct: 303 RDFMVEAGLLGPDAPWRNAYTTRFV 327