Pairwise Alignments

Query, 561 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 574 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  155 bits (391), Expect = 5e-42
 Identities = 133/524 (25%), Positives = 234/524 (44%), Gaps = 23/524 (4%)

Query: 29  VILLAIFLILPIFSVFFISFFDAKTGAFGFSNYAEVFTRRFYTVALWNTLVIGVLGMLGA 88
           +ILL + +++P+ ++F+  F        G     E+FT   +   L N+L +        
Sbjct: 36  LILLVLAVLMPLLAIFWRGFSGEAGQGGGLLAARELFTSASFHWLLGNSLSVAFTVAAIV 95

Query: 89  CLLGIPLAFCTSRYRIKGRTFIATFAVLVLCAPPFIGAYAWIMLFGANGAVTNLLSFAGI 148
             L    AF   R  I  +      ++L L AP  + A A + LFG  G +  LLS    
Sbjct: 96  VPLAYLFAFALQRTLIPAKGLWRGISLLPLLAPSMLPAIALVYLFGNQGLLRGLLS---- 151

Query: 149 SLPTIYGIPGIVMVFSLKFFPYIYLMTENALNTINKSYEDAAENLGCTAFQRFRKITLPL 208
               IYG  GIV+  ++  FP+  ++  +AL+  +    DAA ++G  +++ F  IT P 
Sbjct: 152 --DNIYGFWGIVLGEAIYTFPHALMILLSALSLADARLFDAASSMGAGSWRAFTSITWPA 209

Query: 209 VFPAVSTGAIICFVLSIADFGTPAILGKGIRTLSTIAYAQYTSEMAGTPTMAVTISMVMI 268
              AV     + F L+I DFG P ++G   + L+  AY     +          I MV++
Sbjct: 210 SRQAVFAAFCLVFTLTITDFGVPVVVGGDYQVLALEAYKAVVGQQQFG--RGALIGMVLL 267

Query: 269 AISMAALLLQRHILAKRRYASSLTNRPVKQSMRPLKSFIVHGFCYLVVFIAMLPSLTVIY 328
             ++ +  +   +  +RR   ++  R      +P +       C+L + + +  +L V+ 
Sbjct: 268 LPALFSFTVDAWL--RRRQGEAMGGRAQVFEPKPSRG---RDACFLTIVLLVCAALLVVI 322

Query: 329 TSFLATSGPVFTG-GFGLDSYSRILRDSPQ----AIANSFMFALAAVVL--IAIVSGLLS 381
              + +S   F      L     +  D+      A  NS   A+   ++  I I +G   
Sbjct: 323 GMAVYSSLVTFWPYNLSLSLRHYMFEDTAGGGWLAYRNSVTMAIGTALIGSIVIFTGAYL 382

Query: 382 FIVVRRDNAVSGSLDLLLMVPYLIPGVVMAIGYVTTFRY---PPFDITGTALIIVLLVFI 438
               +    ++ +L LL  +P  +PG+V+ +GYV  F     P   + G   ++V+    
Sbjct: 383 MEKTQGQRLLNHALRLLSFIPMAVPGLVLGLGYVFFFNLNGNPLHVLYGGMGLLVVCTIA 442

Query: 439 RRLPYGVRSTTSILRQIKPSIEEAAVNLGASPAKTFLSVTVPLMLPGLIIGSLMSFITAI 498
             L     + T+ LRQ+    E AA++L A   K FL VTVP+ LP L+      F++A+
Sbjct: 443 HYLTTAQMTATTALRQLDGEFEAAALSLKAPLYKHFLRVTVPICLPALLDIIRYLFVSAM 502

Query: 499 NELSSTLILYTARTITMPVLIYIQVIDGEFGTAAALSTLLLVST 542
             +S+ + LY+  T+   + +      G  G AAA+STL+L+++
Sbjct: 503 TTVSAAIFLYSPDTLLAAIAVLNMDDAGNVGGAAAMSTLILLTS 546