Pairwise Alignments

Query, 330 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 344 a.a., Spermidine/putrescine-binding periplasmic protein from Enterobacter asburiae PDN3

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 82/337 (24%), Positives = 144/337 (42%), Gaps = 27/337 (8%)

Query: 10  RLVAGATFLASAAFAHAEGTVVVYSAA-PQQLMDELLPLFEKKTGTKVELVKAGSGELMN 68
           +++A A  +     AHA+ +  +Y     + +   LL  F K+TG KV      S E M 
Sbjct: 3   KMLAAAALVLGMGAAHADDSKTLYFYNWTEYVPPGLLEQFTKETGIKVIYSTYESNETMY 62

Query: 69  -RIKAETGKAAGDVIWSV--------DGTVIDFSADLFEPYKPVEAASINPAFSPSTNW- 118
            ++K     A   V+ S         +G +          +  ++   +N  F P+ ++ 
Sbjct: 63  AKLKTYKDGAYDLVVPSTYFVDKMRKEGMIQKIDKTKLTHFSNLDPEMLNKPFDPNNDYS 122

Query: 119 VPFTAVVTAFIVNKEALKGAPVPTSWADLAKPEYKG---LISSAR-ADQSGSAYIQMATV 174
           +P+    TA  VN EA+    V TSWADL KPEYKG   L   AR   Q     +  +  
Sbjct: 123 IPYIWGATAIGVNSEAVDPKTV-TSWADLWKPEYKGSLLLTDDAREVFQVALRKLGYSGN 181

Query: 175 LQDFDSEEKGWEIYTGILGNSVLSTSSGAVPRFVNDGEQAVGITLEDAALRYKLGSAPVE 234
             D    E  +     ++ N     S      ++ +GE  +G+    +A   +    P+E
Sbjct: 182 TTDPKEIEAAYAELKKLMPNVAAFNSDNPANPYM-EGEVNLGMVWNGSAYVARQAGTPLE 240

Query: 235 IVYPKEGTAIAPDGMALVKGGPNSENGKAFIDFIVSKEAQEVVVK---------AGRRSV 285
           +V+PKEG     D +A+     N E     I+F++  +  + V +         A RR +
Sbjct: 241 VVWPKEGGIFWMDSLAIPANAKNVEGAHKLINFLLRPDVAKQVAETIGYPTPNLAARRLL 300

Query: 286 RTDVPANVALVPLSDVPDAKYDFKWAADNRSRLMEKW 322
           + +V  + +L P ++   +K +++    + SRL E++
Sbjct: 301 KPEVANDKSLYPDAET-ISKGEWQNDVGDASRLYEEY 336