Pairwise Alignments

Query, 357 a.a., ROK family transcriptional regulator from Agrobacterium fabrum C58

Subject, 387 a.a., Xylose-responsive transcription regulator, ROK family from Variovorax sp. SCN45

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 84/376 (22%), Positives = 143/376 (38%), Gaps = 41/376 (10%)

Query: 1   MSRIELAREMDVSAPTLTRLTSSLLESGLVVEAEEARNDGKRGKPSTAIEINPNGLFTLG 60
           +SR  LA E  ++  T++ L   L++   + E+  A  DG  G+PST + IN      +G
Sbjct: 28  LSRARLAGESGLTKSTVSLLVRELIDEDWLSESGAAVADGL-GRPSTPLRINVGVRALMG 86

Query: 61  VYFNPDDLRVCIADLNGTIRHEVRSDLEDYSFEHIMETAKAAARQVLEKAKVKKK--DVL 118
           V    + +R+    L G + +     L D            A  QV   A V +   + L
Sbjct: 87  VEIAVETVRLVCMSLQGEVLYSDTQALAD-------SAPAGACAQVARMASVAQARLEQL 139

Query: 119 GC-----GISFPGHFKRDRGHVFRIRQFESWHDIDVDKDFQPYFD------FPVFHENDG 167
           G      G+  PG      G V R      W ++ +    +  F         V  +ND 
Sbjct: 140 GLRLSSIGVCVPGAVDDCTG-VVRFAPNLGWRNVSLLPALEKAFGAVGLPRVTVQLQNDA 198

Query: 168 NTVILSELYYGAGRSIRN---FAMIWLTYGIGGAVVVQRHLYRGTNGNAGEFG-GLFPKS 223
           +  +L E  + A            +    G+G  VV+   L+ G  G AGE G  +    
Sbjct: 199 DAAVLGEYEFAASVGQEGEDPLIFVNCDVGVGAGVVLNDRLFTGAQGMAGEIGHTILELD 258

Query: 224 HPRPS-GQDLCDTLAVHGMDIRRLKDIDESYSDHPAVVAWLERATDQLRLLALTVARTID 282
            P  S G+  C   A  G  + R +  D            ++RA     ++   +  T +
Sbjct: 259 GPECSCGRRGC-AEAFFGSRVLRREGRD------------MQRAAAFFGVMLQNLWVTFN 305

Query: 283 PGAIIFGGSLPDWILEHIVQRIGSLEMLGEDFFVEPPEIRKSMMSDL-PHLGAASIPIYR 341
           P AI+ GG +     + +     S+    +   +  P++R +    L P +GAA++ ++ 
Sbjct: 306 PRAIVLGGKVCTDHRDFVQAAFESVHRHADRAGMPAPDLRTARYDALAPAVGAAALALHE 365

Query: 342 ATTPSYYSGRALKGWA 357
              P     +A +  A
Sbjct: 366 YLRPLQPDAKARRARA 381