Pairwise Alignments

Query, 357 a.a., ROK family transcriptional regulator from Agrobacterium fabrum C58

Subject, 406 a.a., DNA-binding transcriptional regulator NagC from Escherichia coli ECRC99

 Score = 79.0 bits (193), Expect = 2e-19
 Identities = 49/219 (22%), Positives = 102/219 (46%), Gaps = 7/219 (3%)

Query: 1   MSRIELAREMDVSAPTLTRLTSSLLESGLVVEAEEARNDGKRGKPSTAIEINPNGLFTLG 60
           +SRI++A +  ++  ++T++T  L+E GL+ E ++  + G  G+ + +I         +G
Sbjct: 33  ISRIQIAEQSQLAPASVTKITRQLIERGLIKEVDQQASTG--GRRAISIVTETRNFHAIG 90

Query: 61  VYFNPDDLRVCIADLNGTIRHEVRSDLEDYSFEHIMETAKAAARQVLEKAKVKKKDVLGC 120
           V     D  + + DL+  +  E    L + + + +      A  Q ++  + K ++++  
Sbjct: 91  VRLGRHDATITLFDLSSKVLAEEHYPLPERTQQTLEHALLNAIAQFIDSYQRKLRELIAI 150

Query: 121 GISFPGHFKRDRG--HVFRIRQFESWHDIDVDKDFQPYFDFPVFHENDGNTVILSELYYG 178
            +  PG    D G  H     Q E+W  ++     +  F    F  +D  ++ L+E Y+G
Sbjct: 151 SVILPGLVDPDSGKIHYMPHIQVENWGLVEA---LEERFKVTCFVGHDIRSLALAEHYFG 207

Query: 179 AGRSIRNFAMIWLTYGIGGAVVVQRHLYRGTNGNAGEFG 217
           A +   +  ++ +  G G  ++    ++ G NGN GE G
Sbjct: 208 ASQDCEDSILVRVHRGTGAGIISNGRIFIGRNGNVGEIG 246