Pairwise Alignments

Query, 426 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 436 a.a., carbohydrate ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  372 bits (955), Expect = e-107
 Identities = 187/418 (44%), Positives = 277/418 (66%), Gaps = 5/418 (1%)

Query: 9   SALVLASVAGLAAAQAETRTITFLFTDDDQGYVQRMAALSKEFEAANPDVKINFVSSGYD 68
           S + L + A + A  A+T+ ITFL++DDD   V  M    K F   N  + +NFVS+GY+
Sbjct: 11  SIMTLGAFASIHAIAAKTQ-ITFLYSDDDPELVHFMEQKVKTFSQNNDHIDVNFVSTGYN 69

Query: 69  AVSKQLPVQLAVGEGPDIAKITDWQLAPYYLDMRPYMKDAEAFAKLHGASLDQL-RLPNV 127
           A+  QLP+QLA G GPDIAK T   L  Y LD+RPY+ D   F K +GA ++++ R+  V
Sbjct: 70  ALQTQLPMQLAAGLGPDIAKTTQMGLLSYTLDLRPYLADPAGFEKRYGAGIEKIMRINGV 129

Query: 128 NDPKSINGYMASQTLNLPFVNKTLFEQAGEPLPGPTAKFGEIVEASARVAKATGVQIPFT 187
           +   ++ G++AS T +LPFVN TLF+QAG PLP P     ++++AS +VA  TGV IPFT
Sbjct: 130 HKDNALPGFVASWTADLPFVNVTLFQQAGVPLPQPGYTLEQLMQASKQVAAKTGVAIPFT 189

Query: 188 MDRSGHRFSGGAFSYGSTYVKDGKFSFPDDAAKKYIADLFSWTQNGSFPKEMWGAAGGSQ 247
           +DRSG RFSG A+SYG+ Y +DG+ +FPD AA+ +I DL  W+ +G FP+EMWGAAGG Q
Sbjct: 190 IDRSGFRFSGPAYSYGARYDQDGRINFPDAAAQAWIKDLKRWSDDGIFPREMWGAAGGGQ 249

Query: 248 YKNMGDEFVNGNVVTYLAGNWMVNPFQNKIGDTFEWTAINAPCGDAGCYAMPGGTAIVGF 307
           YK+M D+FVNGN+VTY +GNW +N F  +IG+ F+W  + APC +  C +M G T I+ F
Sbjct: 250 YKSMADDFVNGNIVTYFSGNWQLNQFSKQIGNGFDWKMLPAPCKEK-CISMGGATFIMPF 308

Query: 308 KRSKYPEDVAHFIEFLGSEKVQREIAENYVVLTGAEIADPQYKLKSENAKAAMQVFLDNK 367
           K SK+P++VA F+E+LGS+  QREIAE + ++ GA+I    Y+ K ++    +       
Sbjct: 309 KTSKHPKEVAEFMEWLGSDATQREIAERFNIIVGADIPALHYQTKDQHVIDGLNTARAEI 368

Query: 368 KNVPQAAREFERAK--GGSAMYQQIVQRMSQLIVGELTLDQTYKVLEDDVAKINEAVA 423
            N+P    ++E+ +  GGS +Y  I+ R +Q +  +++ D+  ++ E+DV ++N+ +A
Sbjct: 369 ANIPAYVFDWEKMESLGGSELYPIILTRFTQYLNNQVSYDEYLRLTENDVKRLNQTIA 426