Pairwise Alignments

Query, 364 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 371 a.a., Rhamnogalacturonides degradation protein RhiN from Sphingobium sp. HT1-2

 Score =  285 bits (728), Expect = 2e-81
 Identities = 143/312 (45%), Positives = 198/312 (63%), Gaps = 4/312 (1%)

Query: 46  WDWEVGVGLYGFLRRALAANDQKALDDLVTWYGWQIDRGLPPRQINSSAPMLPLVILTEH 105
           W+W  GVGL+G  R      DQKAL  +  W+  +   G P + IN+ AP + L  L E+
Sbjct: 52  WEWTHGVGLFGMWRYFEQTGDQKALGIIKQWFEDRFAEGTPTKNINTMAPFITLAYLYEY 111

Query: 106 VDRPDFRALVEDWADWLVHE--LPKTEDGGFQHVVKERLNEGELWDDTLFMACLFLARAG 163
              P +   ++ WA+WL+    LPKTE+GGFQH+V   +N GE+WDDTL M+ L LA+ G
Sbjct: 112 EPDPRYIPYLDVWAEWLMAADGLPKTEEGGFQHIVYNDVNPGEMWDDTLMMSVLPLAKIG 171

Query: 164 VVCKRQDWIDEAVYQFMIHARYLSDPVTGLWYHGWTFNGRHNFADAFWARGNSWITVAIP 223
           ++  R  +++EA  QF++H +YL D  TGLW+HGW FNGRHNFA+A WARGN W+T+AIP
Sbjct: 172 LLLDRPAYVEEAKRQFLVHIKYLYDTKTGLWFHGWDFNGRHNFAEALWARGNCWVTIAIP 231

Query: 224 ELFELVPTLAGKDKR-FLANVLSSQVRSLRKYQ-REDGMFHTLLDDPTSPVETSATAGIA 281
           E+ E++    G   R FL + L++QV++L + Q  E G++HTL+ DPTS +E SATAG A
Sbjct: 232 EIIEILDLKEGDFFRTFLIDTLAAQVKTLAETQDAETGLWHTLIVDPTSYLEASATAGFA 291

Query: 282 YGILRGIEAGILGEENRPHAERALKAVLGNIDDEGVVHGVSDGTPMGHDLDFYRRIPNLP 341
           YGIL+ +  G L         +A++ VL NID+ G +  VS GT MG  + FY+ I    
Sbjct: 292 YGILKAVRKGYLPRHYEAVGIKAVRGVLANIDETGELQQVSFGTAMGDTMQFYKDIALTS 351

Query: 342 TPYGQALTMLLL 353
            PYGQ+L M  L
Sbjct: 352 MPYGQSLAMCAL 363