Pairwise Alignments

Query, 307 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 309 a.a., Inositol transport system sugar-binding protein (from data) from Pseudomonas simiae WCS417

 Score =  235 bits (599), Expect = 1e-66
 Identities = 137/305 (44%), Positives = 199/305 (65%), Gaps = 10/305 (3%)

Query: 5   LMATALCIFATPALAETRIAVSMTSFDNPFLTILLNGIRAEAG---RDKNIELLVEDAQL 61
           L  + L      + A+ +I VSM++FD+ FLT L   +  +A    +   ++L  EDA+ 
Sbjct: 10  LALSMLLASGVASAADLKIGVSMSAFDDTFLTYLREDMDKQAKSYPKGDGVQLQFEDARA 69

Query: 62  DPSKQLNQVQNFIANGVDAIIVNAVDGDATAAITKAASAAKIPLVYVNHPPAELETGLPD 121
           D  KQL+QV+NFI+  VDAIIVN VD  +TA I KAA+AAKIPLV+VN  P + +T L  
Sbjct: 70  DVVKQLSQVENFISQKVDAIIVNPVDTASTANIIKAATAAKIPLVFVNRRP-DSQT-LAP 127

Query: 122 GTAFVGSNELDSGTMEAEAACKLMGGKGKAVILMGPLENHAALVRTKDVETVFSK-PECK 180
           G A V S+++++G ++ +   + +GGKG  VIL+G L N++   RTK V+ V +K P  K
Sbjct: 128 GVAAVTSDDVEAGKLQMQYIAEKLGGKGNIVILLGDLANNSTTNRTKGVKEVLTKYPGIK 187

Query: 181 IEILEKQTANWSRTQAQDLVSSWLTAGIQFDAVIANNDEMAIGAAQALKAAGVSMKDVVI 240
           IE  ++QT  W R +   LV+ WLT G  F AV++NNDEMAIGAA ALK+AG   K V+I
Sbjct: 188 IE--QEQTGIWLRDRGMTLVNDWLTQGRDFQAVLSNNDEMAIGAAMALKSAG--KKGVLI 243

Query: 241 AGIDATPDGLAAMQAGDLDITVYQNATKQGEVSVQTAVKAAAGQSTEKTLWVPFELVTPE 300
           AG+D TPDGL A+  GD+ ++ +Q+A  Q + SV+TA K A  +  E+ + +PF+L+TP+
Sbjct: 244 AGVDGTPDGLNAITKGDMTVSAFQDAKGQADKSVETARKMAKNEPIEQNVVIPFQLITPD 303

Query: 301 NMSAY 305
           N+  +
Sbjct: 304 NVKDF 308