Pairwise Alignments

Query, 307 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 306 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25

 Score =  228 bits (580), Expect = 2e-64
 Identities = 130/305 (42%), Positives = 187/305 (61%), Gaps = 8/305 (2%)

Query: 4   LLMATALCIFATPALAETRI-AVSMTSFDNPFLTILLNGIRAEAGRDKNIELLVEDAQLD 62
           +L   A  +   PA A T +  V M  +D+ F T+L NG++ +AG   N+++ +E+ Q  
Sbjct: 6   MLALGATLLIPGPAQAATPLLGVGMAKYDDNFQTLLRNGVQQQAGV-MNVDIFMENGQDS 64

Query: 63  PSKQLNQVQNFIANGVDAIIVNAVDGDATAAITKAASAAKIPLVYVNHPPAELETGLPDG 122
              Q+ Q +N +   VDAIIV  VDG + A + + AS AKIPLV+VN  P   +   P  
Sbjct: 65  VDLQMRQFRNLVNAKVDAIIVAMVDGKSAAQMMQLASDAKIPLVFVNRNPNPEKW--PAQ 122

Query: 123 TAFVGSNELDSGTMEAEAACKLMGGKGKAVILMGPLENHAALVRTKDVETVFSK-PECKI 181
           TAFVGSNEL+SGT++ E   +  G KG  VIL+G   N ++L+RT+DVE V +K P+ K+
Sbjct: 123 TAFVGSNELESGTLQMEELARRAGYKGNVVILVGDPANASSLMRTEDVEKVVAKYPDMKV 182

Query: 182 EILEKQTANWSRTQAQDLVSSWLTAGIQFDAVIANNDEMAIGAAQALKAAGVSMKDVVIA 241
             ++K+  NW R+QA  +V  W+  G+ F  + ANNDEMAIGA   L+ AG   KD  + 
Sbjct: 183 --VQKKVGNWERSQAATIVIDWVKQGVDFSIIAANNDEMAIGAIMGLEKAGKQAKDYWVG 240

Query: 242 GIDATPDGLAAMQAGDLDITVYQNATKQGEVSVQTAVKAAAGQSTEKT-LWVPFELVTPE 300
           GID TPDGL  M  G + ++V+Q+A  Q   +V TA++   G+  E T +WVPF+L+TPE
Sbjct: 241 GIDGTPDGLKLMAEGKMAVSVFQDAAGQAGGAVDTALRLVRGEVLESTVVWVPFKLITPE 300

Query: 301 NMSAY 305
           N  A+
Sbjct: 301 NRQAF 305