Pairwise Alignments

Query, 313 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 311 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25

 Score =  256 bits (654), Expect = 5e-73
 Identities = 147/314 (46%), Positives = 207/314 (65%), Gaps = 17/314 (5%)

Query: 5   FAIAAFAAMLATG---ASAQTVGVSMALFDDNFLTVLRNGMI----DYSKGMNGVSLQVE 57
           F   A + +LA+G   A+   +GVSM+ FDD FLT LR  M      Y KG +GV LQ E
Sbjct: 7   FTALALSMLLASGFASAADLKIGVSMSAFDDTFLTYLREDMDKQAKSYPKG-DGVQLQFE 65

Query: 58  DAQNDVGKQLSQVQNFVAAGVDAIIVNPVDTDATVALSQAAAAAGIPLVYVNRQPVNLDS 117
           DA+ DV KQLSQV+NF++  VDAIIVNPVDT +T  +  AA  AGIPLV+VNR+P   D 
Sbjct: 66  DARADVVKQLSQVENFISQKVDAIIVNPVDTASTKNIINAATKAGIPLVFVNRRPDQKD- 124

Query: 118 LPDKQAFVASDEKQSGTLQTQEVCRLLKQAGKTDAKAVVMMGELSNQAARMRTQDIKDVV 177
           LP     V SD+ ++G LQ Q +   L   GK     V+++G+L+N +   RT+ +K+V+
Sbjct: 125 LPKDVVAVTSDDIEAGRLQMQYIAEKLGGKGKI----VILLGDLANNSTTNRTKGVKEVL 180

Query: 178 AT-PDCSFIKLVEEQSANWSRTQGSDLMTNWLSAGVEFDAVISNNDEMAIGAIQSLKAAG 236
           A  PD   IK+ +EQ+  W R +G  L+ +WL+ G EF+AV++NNDEMAIGA  +LK+AG
Sbjct: 181 AKYPD---IKIEQEQTGIWLRDKGMTLVNDWLTQGREFNAVLANNDEMAIGASMALKSAG 237

Query: 237 RSMDSVIIAGIDATQDALAAMAAGDLDVSVFQNAAGQGKGALDAALKLAKGETIDKKVFV 296
               SV+IAG+D T D L A+  GD+  S FQ+A GQ  G+++AA K+AK E +++ V +
Sbjct: 238 TKPGSVLIAGVDGTPDGLNAITKGDMAASAFQDAKGQAVGSVEAARKMAKKEPVEQNVII 297

Query: 297 PFELVTPDNLKNYQ 310
           PF+L+TP+N+  ++
Sbjct: 298 PFQLITPENVAQFK 311