Pairwise Alignments

Query, 313 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 308 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25

 Score =  230 bits (587), Expect = 3e-65
 Identities = 134/314 (42%), Positives = 197/314 (62%), Gaps = 10/314 (3%)

Query: 1   MKRHFAIAAFAAMLATG--ASAQTVGVSMALFDDNFLTVLRNGMIDYSKGMNGVSLQVED 58
           M R+  I A   +L +    +A  +GVS+A  DDNF+T +R G+   +K  + V +Q ED
Sbjct: 1   MNRYSLIVATLVLLFSQWTFAAYRIGVSIARVDDNFMTYVRTGLEAAAKQQD-VQIQFED 59

Query: 59  AQNDVGKQLSQVQNFVAAGVDAIIVNPVDTDATVALSQAAAAAGIPLVYVNRQPVNLDSL 118
           AQ DV +QL+QV+ F+   VDA+IV PVDT AT  +++AA AA  PLVYVNR P +  +L
Sbjct: 60  AQGDVVRQLNQVEGFLNQKVDAVIVLPVDTAATANMTRAAVAAKTPLVYVNRHP-DERTL 118

Query: 119 PDKQAFVASDEKQSGTLQTQEVCRLLKQAGKTDAKAVVMMGELSNQAARMRTQDIKDVVA 178
           P     VAS++ ++G LQ + +   L   G       ++MG+L+  A   RT+  K V+ 
Sbjct: 119 PKGVVTVASNDIEAGQLQMRYLAEKLGGKGNV----AIIMGDLAQNATHDRTEGAKQVLK 174

Query: 179 TPDCSFIKLVEEQSANWSRTQGSDLMTNWLSAGVEFDAVISNNDEMAIGAIQSLKAAGRS 238
             D   IK+VE+QSA W R++G DL +NWL AG +FDA+++NNDEMAIGA  +L+ AG++
Sbjct: 175 --DFPGIKVVEQQSAEWQRSKGMDLTSNWLLAGTQFDAIVANNDEMAIGAAMALQQAGKT 232

Query: 239 MDSVIIAGIDATQDALAAMAAGDLDVSVFQNAAGQGKGALDAALKLAKGETIDKKVFVPF 298
              + I GID   D LAA+  G L  SVFQ+   Q   A+ AA+++ KGE I+ +V+VPF
Sbjct: 233 KGEIAIVGIDGLPDGLAAIKRGMLTASVFQDPKAQATQAVHAAVRMIKGEPIEPEVWVPF 292

Query: 299 ELVTPDNLKNYQAK 312
           EL+ P+ +  ++ +
Sbjct: 293 ELIKPEQVAVFEQR 306