Pairwise Alignments

Query, 313 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 306 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25

 Score =  231 bits (588), Expect = 2e-65
 Identities = 133/315 (42%), Positives = 198/315 (62%), Gaps = 14/315 (4%)

Query: 1   MKRHFAIAAFAAMLATG---ASAQTVGVSMALFDDNFLTVLRNGMIDYSKGMNGVSLQVE 57
           MK    +A  A +L  G   A+   +GV MA +DDNF T+LRNG +    G+  V + +E
Sbjct: 1   MKTWLMLALGATLLIPGPAQAATPLLGVGMAKYDDNFQTLLRNG-VQQQAGVMNVDIFME 59

Query: 58  DAQNDVGKQLSQVQNFVAAGVDAIIVNPVDTDATVALSQAAAAAGIPLVYVNRQPVNLDS 117
           + Q+ V  Q+ Q +N V A VDAIIV  VD  +   + Q A+ A IPLV+VNR P N + 
Sbjct: 60  NGQDSVDLQMRQFRNLVNAKVDAIIVAMVDGKSAAQMMQLASDAKIPLVFVNRNP-NPEK 118

Query: 118 LPDKQAFVASDEKQSGTLQTQEVCRLLKQAGKTDAKAVVMMGELSNQAARMRTQDIKDVV 177
            P + AFV S+E +SGTLQ +E+ R     G      V+++G+ +N ++ MRT+D++ VV
Sbjct: 119 WPAQTAFVGSNELESGTLQMEELARRAGYKGNV----VILVGDPANASSLMRTEDVEKVV 174

Query: 178 AT-PDCSFIKLVEEQSANWSRTQGSDLMTNWLSAGVEFDAVISNNDEMAIGAIQSLKAAG 236
           A  PD   +K+V+++  NW R+Q + ++ +W+  GV+F  + +NNDEMAIGAI  L+ AG
Sbjct: 175 AKYPD---MKVVQKKVGNWERSQAATIVIDWVKQGVDFSIIAANNDEMAIGAIMGLEKAG 231

Query: 237 RSMDSVIIAGIDATQDALAAMAAGDLDVSVFQNAAGQGKGALDAALKLAKGETIDKK-VF 295
           +      + GID T D L  MA G + VSVFQ+AAGQ  GA+D AL+L +GE ++   V+
Sbjct: 232 KQAKDYWVGGIDGTPDGLKLMAEGKMAVSVFQDAAGQAGGAVDTALRLVRGEVLESTVVW 291

Query: 296 VPFELVTPDNLKNYQ 310
           VPF+L+TP+N + ++
Sbjct: 292 VPFKLITPENRQAFE 306