Pairwise Alignments

Query, 313 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 307 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

 Score =  312 bits (800), Expect = 6e-90
 Identities = 166/305 (54%), Positives = 225/305 (73%), Gaps = 7/305 (2%)

Query: 7   IAAFAAMLATGASAQT-VGVSMALFDDNFLTVLRNGMIDYSKGMNGVSLQVEDAQNDVGK 65
           +A    + AT A A+T + VSM  FD+ FLT+L NG+   +     + L VEDAQ D  K
Sbjct: 6   MATALCIFATPALAETRIAVSMTSFDNPFLTILLNGIRAEAGRDKNIELLVEDAQLDPSK 65

Query: 66  QLSQVQNFVAAGVDAIIVNPVDTDATVALSQAAAAAGIPLVYVNRQPVNLDS-LPDKQAF 124
           QL+QVQNF+A GVDAIIVN VD DAT A+++AA+AA IPLVYVN  P  L++ LPD  AF
Sbjct: 66  QLNQVQNFIANGVDAIIVNAVDGDATAAITKAASAAKIPLVYVNHPPAELETGLPDGTAF 125

Query: 125 VASDEKQSGTLQTQEVCRLLKQAGKTDAKAVVMMGELSNQAARMRTQDIKDVVATPDCSF 184
           V S+E  SGT++ +  C+L+   GK    AV++MG L N AA +RT+D++ V + P+C  
Sbjct: 126 VGSNELDSGTMEAEAACKLMGGKGK----AVILMGPLENHAALVRTKDVETVFSKPECK- 180

Query: 185 IKLVEEQSANWSRTQGSDLMTNWLSAGVEFDAVISNNDEMAIGAIQSLKAAGRSMDSVII 244
           I+++E+Q+ANWSRTQ  DL+++WL+AG++FDAVI+NNDEMAIGA Q+LKAAG SM  V+I
Sbjct: 181 IEILEKQTANWSRTQAQDLVSSWLTAGIQFDAVIANNDEMAIGAAQALKAAGVSMKDVVI 240

Query: 245 AGIDATQDALAAMAAGDLDVSVFQNAAGQGKGALDAALKLAKGETIDKKVFVPFELVTPD 304
           AGIDAT D LAAM AGDLD++V+QNA  QG+ ++  A+K A G++ +K ++VPFELVTP+
Sbjct: 241 AGIDATPDGLAAMQAGDLDITVYQNATKQGEVSVQTAVKAAAGQSTEKTLWVPFELVTPE 300

Query: 305 NLKNY 309
           N+  Y
Sbjct: 301 NMSAY 305