Pairwise Alignments

Query, 253 a.a., IclR family transcriptional regulator from Agrobacterium fabrum C58

Subject, 291 a.a., transcription regulatory protein (pca regulon) from Pseudomonas putida KT2440

 Score =  202 bits (513), Expect = 8e-57
 Identities = 109/247 (44%), Positives = 160/247 (64%), Gaps = 1/247 (0%)

Query: 7   DMMGGLAKGLRVIEAFSAERPRLSISDAAEIAGLDRATTRRCLLTLSELGYAAYDGKFFT 66
           D M  LA+GL VI+AF   +  L+I+  +    + RA  RRCL TL +LGYA  DG+ ++
Sbjct: 43  DFMTSLARGLAVIQAFQERKRHLTIAQISHRTEIPRAAVRRCLHTLIKLGYATTDGRTYS 102

Query: 67  VTPKVLRLGTGCLATMPLPKIVQPLLDRLSEEIGQSTSVSILDEAEIVYVARAAQ-QRVM 125
           + PKVL LG   L++ PL    QP LDR+S+++ ++ +++ L+  +I+Y+AR+A  +R++
Sbjct: 103 LLPKVLTLGHAYLSSTPLAISAQPYLDRISDQLHEAANMATLEGDDILYIARSATVERLI 162

Query: 126 SIALMPGSRLPAYCTSMGRVLLAAQPAERRRDILEASRLVARTEKTITDMDALLAEIEVT 185
           S+ L  G RLPAYCTSMGR+LLAA      R+ LE + L ART +T+ D ++L A I+  
Sbjct: 163 SVDLSVGGRLPAYCTSMGRILLAAMDDTSLREYLERADLKARTSRTLNDPESLFACIQQV 222

Query: 186 GHRGYALIDQEVEIGLRSIAVPLKTVRGQTVAALNVGLAASVASMEELVERYLPALLAVQ 245
             +G+ ++DQE+E GLRSIAVP+    GQ +AALNV       +  EL +R+LP LLA  
Sbjct: 223 RAQGWCVVDQELEQGLRSIAVPVYDASGQVLAALNVSTHVGRVTRSELEQRFLPILLAAS 282

Query: 246 RELARML 252
           R+L   L
Sbjct: 283 RDLCHQL 289



 Score = 22.7 bits (47), Expect = 0.009
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 8/65 (12%)

Query: 111 AEIVYVARAAQQRVMSIALMPGSRL------PAYCTSMGRVLLAAQPAERRRDILEASRL 164
           AE+   A AA      I   P  R+      P + TS+ R L   Q  + R+  L  +++
Sbjct: 13  AEVARPASAAM--APPIVASPAKRIQAFTGDPDFMTSLARGLAVIQAFQERKRHLTIAQI 70

Query: 165 VARTE 169
             RTE
Sbjct: 71  SHRTE 75