Pairwise Alignments

Query, 206 a.a., protocatechuate 3,4-dioxygenase alpha chain from Agrobacterium fabrum C58

Subject, 239 a.a., protocatechuate 3,4-dioxygenase beta chain from Pseudomonas putida KT2440

 Score = 83.6 bits (205), Expect = 3e-21
 Identities = 71/214 (33%), Positives = 99/214 (46%), Gaps = 25/214 (11%)

Query: 3   QPLNYFKETASQTAGP-YVHIGCTPNFVGIEGVFEKDLGSGPLYNDKARGERISVRGTVY 61
           Q L    ++ S+T GP + H+G         G  + DL           GERI V G V 
Sbjct: 35  QALVSIPQSISETTGPDFSHLGF--------GAHDHDLLLNFNNGGLPIGERIIVAGRVV 86

Query: 62  DGAGMALKDALIEIWQADTDGYYNSPSET-RGKADPNFIGWGRSPGDMDTGEFIFETIKP 120
           D  G  + + L+E+WQA+  G Y   ++      DPNF G GR   D D G + F TIKP
Sbjct: 87  DQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDRD-GYYSFRTIKP 145

Query: 121 GTVPFRDG----RPMAPHITFWIVARGINIGLQTRMYFPEEQEANAADPVLARVEQKSRI 176
           G  P+R+G    RP   HI F I    I   L T++YF E        P++  +     +
Sbjct: 146 GPYPWRNGPNDWRP--AHIHFAISGPSIATKLITQLYF-EGDPLIPMCPIVKSIANPQAV 202

Query: 177 ATLVAQKEEGN-------VYRFDIRLQGEGETVF 203
             L+A+ +  N        YRFDI L+G+ +T F
Sbjct: 203 QQLIAKLDMSNANPMDCLAYRFDIVLRGQRKTHF 236