Pairwise Alignments

Query, 633 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 635 a.a., putative 3-dehydroshikimate dehydratase from Pseudomonas putida KT2440

 Score =  527 bits (1357), Expect = e-154
 Identities = 292/629 (46%), Positives = 381/629 (60%), Gaps = 11/629 (1%)

Query: 1   MRTSIATVSISGEFPEKLAAIAKAGFSGVEIFENDFLTYDASPREVKALAADHGLDITLF 60
           M+ SIATVS+SG  PEKL AIA AGF GVEIFEND L Y  SPR+V+ + AD G+ ITLF
Sbjct: 1   MQRSIATVSLSGTLPEKLEAIAAAGFDGVEIFENDLLYYAGSPRQVRQMCADLGIAITLF 60

Query: 61  QPFRDFEGMPEPHRARAFERAERKFDIMGELGTDLMLICSNVSQVSLGGIDRAAADFHEL 120
           QPFRDFEG       +  +RAERKFD+M ELGTDL+L+CSNV   +LG       D   L
Sbjct: 61  QPFRDFEGCRRDRLQKNLDRAERKFDLMQELGTDLVLVCSNVQADALGDEQLLVDDLRLL 120

Query: 121 GELAAKHGVRVGYEALAWGRHISDHRDAWEVVRRADHANVGIILDSFHTLSRKIDPNSIR 180
           GE A K G+R+GYEALAWGRH++ ++  W +VR+ADH  +G+ILDSFHTLS K DP++IR
Sbjct: 121 GEHAGKRGLRIGYEALAWGRHVNTYQQVWNLVRQADHPALGVILDSFHTLSLKGDPSAIR 180

Query: 181 SIPGDKIFIVQLADAPLIDMDLLYWSRHFRNMPGEGDLPVVDFMRAVAATGYSGPLSLEI 240
            IPGDKIF VQ+ADAP++ MD+L WSRHFR  PG+G++ +  F+  + ATGY GPLSLEI
Sbjct: 181 DIPGDKIFFVQMADAPILAMDVLEWSRHFRCFPGQGEMDMAGFLAPILATGYRGPLSLEI 240

Query: 241 FNDQFRGGSARLLAEDGHRSLINLMDQVR-RLEPDIRIDVPAM----PERVETQGVEFVE 295
           FND FR    R  A DG RSL+ L +Q R RLE +     P +    P      GVEF+E
Sbjct: 241 FNDGFRAAPTRQNAADGLRSLLYLEEQTRLRLEQENTPIEPGVLFSPPPASAYDGVEFLE 300

Query: 296 FSTAPEEKANLEVLLATLGFEKSAQHRNRAVDLYTQGDIRIVINTSDDGDSFAGASYSIH 355
           F+      A L   L  LGF ++ +HR++ V L  QGDI IV+N   +  SF    +  H
Sbjct: 301 FAVDEAVGARLGNWLKRLGFAEAGKHRSKEVQLLRQGDINIVLNA--EPYSFGHNFFEAH 358

Query: 356 GTNAYAFGLKVDDAQAALARAEALGAPTFAEPRNTGEVAVPAIQGVGNGVIYFLDASPAL 415
           G +  A  L+V D QAAL RA A     F       E  VPA++     ++Y ++   A 
Sbjct: 359 GPSLCATALRVKDQQAALKRATAFRGQPFRGLVGPNECEVPAVRAPDGSLLYLVEQGTAG 418

Query: 416 ASIWDKEFVPTQGQKAMSDAGLTRVDHLAQTTHYDEMLTWLLFYTSLFSSRRTPMIDVVD 475
            +++D +F  +    A +  GL R+DH+A     + + +W+LFY SLF       + + D
Sbjct: 419 HTLYDTDF--SLDNNATATGGLRRIDHMALALPAESLDSWVLFYKSLFDFAADDEVVLPD 476

Query: 476 PGGLVRSQAIESVPAANFRLTMNGADNRKTFAGKFLAEGFGSSIQHIAFATDDIFATAKA 535
           P GLV+S+A+ S      RL +N ++NR T     L+   GS + HIAF  DDIF     
Sbjct: 477 PYGLVKSRALRS-QCGTLRLPLNISENRNTAIAHALSSYRGSGVHHIAFDCDDIFREVAR 535

Query: 536 MQARGFHALPISRNYYDDLEARFGLEPEFSDALREASILYDRD-DSGEYFQIYSRTFGEG 594
            +  G   L I  NYYDDL ARF  + EF   L   ++LYDRD   GE F +Y+  F E 
Sbjct: 536 AKLAGVPLLEIPLNYYDDLAARFDFDDEFLSELAYYNVLYDRDAQGGELFHVYTEPFEER 595

Query: 595 FFFEVIERRGAYGGYGAMNAPFRIAAQRR 623
           FFFE+I+R+  Y GYGA N   R+AA  +
Sbjct: 596 FFFEIIQRKAGYAGYGAANVAVRLAAMAK 624