Pairwise Alignments

Query, 264 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 336 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  195 bits (496), Expect = 9e-55
 Identities = 107/284 (37%), Positives = 155/284 (54%), Gaps = 28/284 (9%)

Query: 7   ARIRAALGTDRPFFVQYFSFLKGLVTLDFGRSFTGSTPVSRLIADALPATLLLAFISMAV 66
           A+    LG ++P  VQY  ++  L   D G S      V R      PATL LAF ++  
Sbjct: 50  AQAMERLGLNKPLPVQYLDYVGKLAQGDLGESLRTRESVWREFLTLFPATLELAFAALLF 109

Query: 67  SIALSIPLGIKAATSRGKTADQVIRIFSLIGLSFPNFWLATMLVLLFSITLGWLPPSGM- 125
           +  + +  G+ AA  RG   D  +   SL G S P FW   +L++ FS++LGW P SG  
Sbjct: 110 AGVVGLLAGVIAALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRI 169

Query: 126 -----------------------GGFASYIM----PSVTMGVILTATNVRLVRTAMLDTL 158
                                  G F   +M    P++ +G I  A   R+ R++ML+ L
Sbjct: 170 DLLYDIEPKTGFMLIDTLLSDEEGAFKDAVMHLILPAIVLGTIPLAVIARMTRSSMLEVL 229

Query: 159 RSQYVMVARAKGLSESKVLYKHALRNCAIPLITYFGLQFGGLLGGIVVIERVFNWPGLGT 218
           R  Y+  ARAKGLS ++V++ H LRN  IP++T FGLQ G LL G V+ E +F+WPG+G 
Sbjct: 230 REDYIRTARAKGLSPARVVFVHGLRNALIPVLTVFGLQVGTLLAGAVLTETIFSWPGIGK 289

Query: 219 LAFDAVGARDYPVLQAVITVLSLMIVGINLLVDIAYGLVDPRIR 262
              +A+GARDYPV+Q  I +++ +++ +N +VDI YGL +PRIR
Sbjct: 290 WLIEAIGARDYPVVQNGILLIACLVILVNFVVDILYGLANPRIR 333