Pairwise Alignments

Query, 282 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  213 bits (542), Expect = 4e-60
 Identities = 113/272 (41%), Positives = 173/272 (63%), Gaps = 2/272 (0%)

Query: 11  FANLEFVLGAFLTTVICLAVVFSDVLFPGGADKIDLMARLAKPFANAAHPLGTDPLGRDV 70
           F N    +G  L  +I L  +F+ ++ P    + ++  RL  P  +A   LGTD  GRDV
Sbjct: 20  FQNRLSWIGIGLLVMIVLVALFAPLIAPYDPLQQNIAYRLEPP--SAEFWLGTDTYGRDV 77

Query: 71  LARVVAGGKISLLVGFTSVIGAVIFGVAVGLVAGYYRGFWDMLVMRFADIQLAMPFILLA 130
           L+R++ G ++SLLVGF +V+ A++ G A+G++AGY  G  D L+  F D+ L+ P +LL 
Sbjct: 78  LSRLIYGTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLLSFPTLLLG 137

Query: 131 ITFIAIVGGSLTNTIILLIISQWVQYARLVRGSVLTLREREFILSARAIGVKDWRIILQH 190
           +   A++G SL N II + I++   + R+ R   + L++R+F+ + R++G    R++  H
Sbjct: 138 LMVAAMLGASLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYGPGRLMTVH 197

Query: 191 LLPNLIGPVIVLMTLNVANNILLESSLTFLGLGVDPTIPSWGGMLADGRTYLQTAWWVSV 250
           +LPN+I  V+VL  L +A  I  E+SL+F+GLGV P  P+WG M+ +G   +  AWW++V
Sbjct: 198 ILPNMISEVLVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENILDAWWLTV 257

Query: 251 FPGLAILLTVLGLNLLGDWLRDSLDPTGRTSR 282
           FP LAILLTVL L+LLGD LRD+ DP  R+ R
Sbjct: 258 FPSLAILLTVLALSLLGDALRDANDPKTRSER 289