Pairwise Alignments

Query, 282 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli ECRC62

 Score =  192 bits (487), Expect = 1e-53
 Identities = 101/260 (38%), Positives = 153/260 (58%), Gaps = 2/260 (0%)

Query: 17  VLGAFLTTVICLAVVFSDVLFPGGADKIDLMARLAKPFANAAHPLGTDPLGRDVLARVVA 76
           V GA +  ++ L ++FS  L     + IDL ARL  P  +AAH  GTD +GRD+ +RV+ 
Sbjct: 34  VTGAVIIVLMLLMMIFSPWLATHDPNAIDLTARLLPP--SAAHWFGTDEVGRDLFSRVLV 91

Query: 77  GGKISLLVGFTSVIGAVIFGVAVGLVAGYYRGFWDMLVMRFADIQLAMPFILLAITFIAI 136
           G + S+L G   V  A + G  +G ++G   G  D ++MR  DI L++P ++L +   A 
Sbjct: 92  GSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAA 151

Query: 137 VGGSLTNTIILLIISQWVQYARLVRGSVLTLREREFILSARAIGVKDWRIILQHLLPNLI 196
           +G SL N ++ + I +   Y RL RG  L +R+  ++ +A+  G   W +I  H+L N +
Sbjct: 152 LGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHILRNSL 211

Query: 197 GPVIVLMTLNVANNILLESSLTFLGLGVDPTIPSWGGMLADGRTYLQTAWWVSVFPGLAI 256
            P+IV  +L++ + IL+ ++L F+GLG       WG M+A+GR Y+   WW   FPG AI
Sbjct: 212 PPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFPGAAI 271

Query: 257 LLTVLGLNLLGDWLRDSLDP 276
           LLT +G NL GD +RD LDP
Sbjct: 272 LLTAVGFNLFGDGIRDLLDP 291