Pairwise Alignments

Query, 335 a.a., branched chain amino acid ABC transporter permease from Agrobacterium fabrum C58

Subject, 392 a.a., ABC transporter, membrane spanning protein (urea/amide) from Agrobacterium fabrum C58

 Score =  108 bits (271), Expect = 2e-28
 Identities = 86/321 (26%), Positives = 144/321 (44%), Gaps = 32/321 (9%)

Query: 45  LALLTRIIAIALLVLSIDLVTGYCGVATLGHAALFGAGAYAAGI----------AAAHFE 94
           +++L + +A ALL L++DLV GYCG+ +LGHAA F  G YA G+             H  
Sbjct: 48  MSMLGKYLAYALLALALDLVWGYCGILSLGHAAFFALGGYAMGMYLMRQIGTRGVYGHPV 107

Query: 95  ITDPLLM-------------------TVIGAAGGGVAGLLSGTVLLRA--HGLPQLVLSI 133
           + D ++                     ++     G+   + G    R+  +G+   +++ 
Sbjct: 108 LPDFMVFLNWKELPWFWHGFDMFWFAALMVLVVPGLLAFVFGWFAFRSRVNGVYLSIITQ 167

Query: 134 AVIHLFHEAANKASGWTGGSDGLSGVSPDALFGTFEFDLFGRTAYVYGVCLLLLVFIALR 193
           A+ +    A  +     GG++GL+    D L  + + D      +     +L L  +   
Sbjct: 168 AMTYALLLAFFRNDMGFGGNNGLTDFK-DILGFSVQADGTRAMLFAMTAAMLALSLLIAS 226

Query: 194 VVVNSPFGMLCRGVKQDSIRIQAMGGSVNGTVLKMFVISGIVAGIGGALNAISTQVVGLD 253
            +VNS FG +  GV+    R++ +G  V    L  FV+S ++AG+ GAL      ++   
Sbjct: 227 GIVNSKFGKVLVGVRDAESRVRFLGFRVENIKLFTFVVSAMMAGVAGALFVPQVGIINPG 286

Query: 254 SLSFTLSAEGLVMLVLGGAGSLYGALIGTVTFMWFEDVVSAANPFHWLTIVGLLLIAVVL 313
             S   S E +V   +GG G+L G +IG +     +   + A P  WL  +G L IAV L
Sbjct: 287 EFSPANSIEVVVWTAVGGRGTLIGPIIGALLVNGGKSYFTGAFPEFWLFALGGLFIAVTL 346

Query: 314 FAPRGLYGAGEQIIGRLRGDR 334
           F P+G+ G  +  +   R  R
Sbjct: 347 FFPKGIVGTIQHYLAGRREKR 367